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Aliases for GC0XM119647 Gene

Subcategory (RNA class) for GC0XM119647 Gene

miRNA

Quality Score for this RNA gene is

0

Aliases for GC0XM119647 Gene

No Aliases found

ORGUL Members for GC0XM119647 Gene

No data available for External Ids for GC0XM119647 Gene

Summaries for GC0XM119647 Gene

GeneCards Summary for GC0XM119647 Gene

GC0XM119647 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC0XM119647 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

Additional gene information for GC0XM119647 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XM119647 Gene

Genomics for GC0XM119647 Gene

GeneHancer (GH) Regulatory Elements for GC0XM119647 Gene

Promoters and enhancers for GC0XM119647 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI119646 Enhancer 1 ENCODE dbSUPER 550.8 -0.7 -739 2.8 PKNOX1 SMAD1 BMI1 BATF RAD21 KLF5 IRF4 ZNF207 ZNF143 ATF7 GC0XM119647 GC0XM119648 MIR766 CXorf56 SEPT6
GH0XI119674 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -37.9 -37856 20.2 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B FEZF1 IRF4 YY1 POLR2B SEPT6 NKAPP1 EEF1A1P30 CUL4B UPF3B NKAP NKRF MIR766 CXorf56 LINC01402
GH0XI119653 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -8.0 -8046 2.4 CTCF EBF1 BATF ZNF121 FOSL1 ZFHX2 NCOR1 EGR1 FOS IKZF2 CXorf56 GC0XM119647 MIR766 SEPT6
GH0XI119669 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -22.9 -22919 1.4 SOX13 FOXA2 SAP130 ARID4B DMAP1 ZNF644 ZNF48 TEAD3 POLR2A RCOR1 MIR766 GC0XM119647 SEPT6
GH0XI119656 Enhancer 0.8 ENCODE dbSUPER 0.4 -9.5 -9477 0.5 SMARCE1 PKNOX1 NFIB DPF2 ZBTB7B ZNF217 CTBP1 JUND GATA3 RCOR1 GC0XM119647 MIR766 SEPT6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC0XM119647 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC0XM119647 Gene

Genomic Locations for GC0XM119647 Gene
chrX:119,646,737-119,646,848
(GRCh38/hg38)
Size:
112 bases
Orientation:
Minus strand
chrX:119,636,891-119,636,939
(GRCh37/hg19)

Genomic View for GC0XM119647 Gene

Genes around GC0XM119647 on UCSC Golden Path with GeneCards custom track

GC0XM119647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XM119647 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XM119647 Gene

Proteins for GC0XM119647 Gene

Post-translational modifications for GC0XM119647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XM119647 Gene

Domains & Families for GC0XM119647 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XM119647 Gene

Function for GC0XM119647 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XM119647 Gene

Localization for GC0XM119647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XM119647 Gene

Pathways & Interactions for GC0XM119647 Gene

SuperPathways for GC0XM119647 Gene

No Data Available

Interacting Proteins for GC0XM119647 Gene

Gene Ontology (GO) - Biological Process for GC0XM119647 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XM119647 Gene

Drugs & Compounds for GC0XM119647 Gene

No Compound Related Data Available

Transcripts for GC0XM119647 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XM119647 Gene

No ASD Table

Relevant External Links for GC0XM119647 Gene

GeneLoc Exon Structure for
GC0XM119647

No data available for mRNA/cDNA for GC0XM119647 Gene

Expression for GC0XM119647 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XM119647 Gene

Orthologs for GC0XM119647 Gene

No data available for Orthologs and Evolution for GC0XM119647 Gene

Paralogs for GC0XM119647 Gene

No data available for Paralogs for GC0XM119647 Gene

Variants for GC0XM119647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC0XM119647 Gene

Disorders for GC0XM119647 Gene

No disorders were found for GC0XM119647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XM119647 Gene

Publications for GC0XM119647 Gene

  1. Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. (PMID: 16954537) Berezikov E … Cuppen E (Genome research 2006) 1

Products for GC0XM119647 Gene

Sources for GC0XM119647 Gene

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