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Aliases for GC0XM013378 Gene

Subcategory (RNA class) for GC0XM013378 Gene


Quality Score for this RNA gene is


Aliases for GC0XM013378 Gene

No Aliases found

ORGUL Members for GC0XM013378 Gene

No data available for External Ids for GC0XM013378 Gene

Summaries for GC0XM013378 Gene

GeneCards Summary for GC0XM013378 Gene

GC0XM013378 is an RNA Gene, and is affiliated with the SECIS RNA class.

fRNAdb sequence ontologies for GC0XM013378 Gene

  • SECIS_element: The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.

Additional gene information for GC0XM013378 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XM013378 Gene

Genomics for GC0XM013378 Gene

GeneHancer (GH) Regulatory Elements for GC0XM013378 Gene

Promoters and enhancers for GC0XM013378 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI013375 Enhancer 0.9 ENCODE dbSUPER 550.8 +1.6 1560 2.9 FOXA2 ZNF680 MAX MZF1 EBF1 BATF ATF2 OSR2 ATF4 PRDM6 ENSG00000226434 GC0XM013378 GPX1P1 LOC105373137 GC0XM013353
GH0XI013378 Promoter/Enhancer 0.7 Ensembl dbSUPER 550.8 -0.3 -320 0.8 ENSG00000226434 GC0XM013378 GC0XM013379 GC0XM013380 GPX1P1 LOC105373137 GC0XM013353
GH0XI013379 Enhancer 0.5 ENCODE dbSUPER 550.8 -1.7 -1723 1.1 ZNF680 GC0XM013378 GC0XM013379 GC0XM013380 GC0XP013382 GPX1P1 ENSG00000226434 LOC105373137 GC0XM013353
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC0XM013378 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC0XM013378 Gene

Genomic Locations for GC0XM013378 Gene
64 bases
Minus strand

Genomic View for GC0XM013378 Gene

Genes around GC0XM013378 on UCSC Golden Path with GeneCards custom track

GC0XM013378 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XM013378 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XM013378 Gene

Proteins for GC0XM013378 Gene

Post-translational modifications for GC0XM013378 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XM013378 Gene

Domains & Families for GC0XM013378 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XM013378 Gene

Function for GC0XM013378 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XM013378 Gene

Localization for GC0XM013378 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XM013378 Gene

Pathways & Interactions for GC0XM013378 Gene

SuperPathways for GC0XM013378 Gene

No Data Available

Interacting Proteins for GC0XM013378 Gene

Gene Ontology (GO) - Biological Process for GC0XM013378 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC0XM013378 Gene

Drugs & Compounds for GC0XM013378 Gene

No Compound Related Data Available

Transcripts for GC0XM013378 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XM013378 Gene

No ASD Table

Relevant External Links for GC0XM013378 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC0XM013378 Gene

Expression for GC0XM013378 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XM013378 Gene

Orthologs for GC0XM013378 Gene

No data available for Orthologs and Evolution for GC0XM013378 Gene

Paralogs for GC0XM013378 Gene

No data available for Paralogs for GC0XM013378 Gene

Variants for GC0XM013378 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC0XM013378 Gene

Disorders for GC0XM013378 Gene

No disorders were found for GC0XM013378 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XM013378 Gene

Publications for GC0XM013378 Gene

  1. A survey of metazoan selenocysteine insertion sequences. (PMID: 12458087) Lambert A … Gautheret D (Biochimie 2002) 1
  2. A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. (PMID: 8634917) Walczak R … Krol A (RNA (New York, N.Y.) 1996) 1

Products for GC0XM013378 Gene

Sources for GC0XM013378 Gene

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