Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC09P135871 Gene

Subcategory (RNA class) for GC09P135871 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC09P135871 Gene

No Aliases found

ORGUL Members for GC09P135871 Gene

No data available for External Ids for GC09P135871 Gene

Summaries for GC09P135871 Gene

GeneCards Summary for GC09P135871 Gene

GC09P135871 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC09P135871 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC09P135871 Gene

Genomics for GC09P135871 Gene

GeneHancer (GH) Regulatory Elements for GC09P135871 Gene

Promoters and enhancers for GC09P135871 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I135904 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +35.0 35016 5.2 ARID4B SIN3A DMAP1 IRF4 BRCA1 ZNF48 POLR2B GLIS2 FOS RUNX3 ENSG00000238058 CAMSAP1 GC09P135871
GH09I135886 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.1 17088 5.6 HDGF CTCF PKNOX1 NFIB MAX EBF1 E2F1 ZFHX2 GATA3 POLR2A ENSG00000238058 KCNT1 CAMSAP1 GC09P135871
GH09I135883 Enhancer 0.7 ENCODE 0.4 +12.9 12948 1.7 FOXA2 KLF17 PYGO2 ZNF366 EGR1 PATZ1 ZNF600 ZNF639 RFX1 FOXA3 ENSG00000238058 CAMSAP1 UBAC1 GC09P135871
GH09I135901 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +31.3 31261 2.3 MAFF ZNF316 SCRT2 MNT MAFK EMSY CAMSAP1 GC09P135871
GH09I135864 Enhancer 0.6 ENCODE 0.4 -7.2 -7182 0.2 CTCF ZNF654 RB1 ARID4B TRIM22 REST EBF1 RAD21 RFX5 SMC3 ENSG00000238058 GC09P135871 CAMSAP1 LOC105376319
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09P135871 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09P135871 Gene

Genomic Locations for GC09P135871 Gene
chr9:135,871,812-135,890,519
(GRCh38/hg38)
Size:
18,708 bases
Orientation:
Plus strand

Genomic View for GC09P135871 Gene

Genes around GC09P135871 on UCSC Golden Path with GeneCards custom track

GC09P135871 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P135871 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P135871 Gene

Proteins for GC09P135871 Gene

Post-translational modifications for GC09P135871 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P135871 Gene

Domains & Families for GC09P135871 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P135871 Gene

Function for GC09P135871 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P135871 Gene

Localization for GC09P135871 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P135871 Gene

Pathways & Interactions for GC09P135871 Gene

SuperPathways for GC09P135871 Gene

No Data Available

Interacting Proteins for GC09P135871 Gene

Gene Ontology (GO) - Biological Process for GC09P135871 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P135871 Gene

Drugs & Compounds for GC09P135871 Gene

No Compound Related Data Available

Transcripts for GC09P135871 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P135871 Gene

No ASD Table

Relevant External Links for GC09P135871 Gene

GeneLoc Exon Structure for
GC09P135871

No data available for mRNA/cDNA for GC09P135871 Gene

Expression for GC09P135871 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P135871 Gene

Orthologs for GC09P135871 Gene

No data available for Orthologs and Evolution for GC09P135871 Gene

Paralogs for GC09P135871 Gene

No data available for Paralogs for GC09P135871 Gene

Variants for GC09P135871 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09P135871 Gene

Disorders for GC09P135871 Gene

No disorders were found for GC09P135871 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P135871 Gene

Publications for GC09P135871 Gene

No publications were found for GC09P135871 Gene.

Products for GC09P135871 Gene

Sources for GC09P135871 Gene

Content
Loading form....