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Aliases for GC09P130986 Gene

Subcategory (RNA class) for GC09P130986 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC09P130986 Gene

No Aliases found

ORGUL Members for GC09P130986 Gene

No data available for External Ids for GC09P130986 Gene

Summaries for GC09P130986 Gene

GeneCards Summary for GC09P130986 Gene

GC09P130986 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09P130986 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09P130986

Additional gene information for GC09P130986 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P130986 Gene

Genomics for GC09P130986 Gene

GeneHancer (GH) Regulatory Elements for GC09P130986 Gene

Promoters and enhancers for GC09P130986 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J130998 Enhancer 0.8 ENCODE 0.4 +11.7 11656 0.2 KLF17 KLF14 ZNF2 ZNF48 RAD21 GLIS2 ZNF143 DEK SMARCA5 ZNF654 LAMC3 GC09P130986
GH09J130995 Enhancer 0.7 ENCODE 0.4 +8.6 8603 1.5 PKNOX1 ZSCAN4 SALL2 ZIC2 RFX5 GLIS2 ZBTB48 POLR2A ZNF547 ZNF600 NCS1 GC09P130986 LAMC3
GH09J130961 Enhancer 0.9 Ensembl ENCODE 0.3 -24.2 -24157 1.7 MXI1 JUN SREBF2 MAX RFX5 ZKSCAN1 POLR2A ZNF143 RCOR1 FOSL2 FIBCD1 LOC105376297 QRFP NUP214 GC09P130986
GH09J130946 Enhancer 0.9 Ensembl ENCODE 0.3 -39.5 -39536 1.4 PKNOX1 MXI1 JUN MAX ZIC2 POLR2A PRDM10 FOS MAFK NFE2L2 FIBCD1 GC09P130986
GH09J130994 Enhancer 0.5 ENCODE 0.4 +7.7 7666 0.2 ZNF143 ZFP36 RCOR1 FOS ZIC2 GC09P130986 LAMC3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09P130986 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09P130986 Gene

Genomic Locations for GC09P130986 Gene
chr9:130,986,843-130,987,070
(GRCh38/hg38)
Size:
228 bases
Orientation:
Plus strand

Genomic View for GC09P130986 Gene

Genes around GC09P130986 on UCSC Golden Path with GeneCards custom track

GC09P130986 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P130986 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P130986 Gene

ORGUL Member Location for GC09P130986 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P130986 Gene

Proteins for GC09P130986 Gene

Post-translational modifications for GC09P130986 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P130986 Gene

Domains & Families for GC09P130986 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P130986 Gene

Function for GC09P130986 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC09P130986 Gene

Localization for GC09P130986 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P130986 Gene

Pathways & Interactions for GC09P130986 Gene

SuperPathways for GC09P130986 Gene

No Data Available

Interacting Proteins for GC09P130986 Gene

Gene Ontology (GO) - Biological Process for GC09P130986 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09P130986 Gene

Drugs & Compounds for GC09P130986 Gene

No Compound Related Data Available

Transcripts for GC09P130986 Gene

fRNAdb Secondary structures for GC09P130986 Gene

  • FR361982
  • FR079179

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P130986 Gene

No ASD Table

Relevant External Links for GC09P130986 Gene

GeneLoc Exon Structure for
GC09P130986

No data available for mRNA/cDNA for GC09P130986 Gene

Expression for GC09P130986 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P130986 Gene

Orthologs for GC09P130986 Gene

No data available for Orthologs and Evolution for GC09P130986 Gene

Paralogs for GC09P130986 Gene

No data available for Paralogs for GC09P130986 Gene

Variants for GC09P130986 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09P130986 Gene

Disorders for GC09P130986 Gene

No disorders were found for GC09P130986 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P130986 Gene

Publications for GC09P130986 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC09P130986 Gene

Sources for GC09P130986 Gene

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