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Aliases for GC09P095906 Gene

Subcategory (RNA class) for GC09P095906 Gene


Quality Score for this RNA gene is


Aliases for GC09P095906 Gene

No Aliases found

ORGUL Members for GC09P095906 Gene

No data available for External Ids for GC09P095906 Gene

Summaries for GC09P095906 Gene

GeneCards Summary for GC09P095906 Gene

GC09P095906 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC09P095906 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC09P095906 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P095906 Gene

Genomics for GC09P095906 Gene

GeneHancer (GH) Regulatory Elements for GC09P095906 Gene

Promoters and enhancers for GC09P095906 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I095874 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 -29.0 -28952 3.4 CLOCK MLX ZFP64 DMAP1 IRF4 YY1 E2F8 ZNF143 ZNF548 SP3 ERCC6L2 LINC00476 ENSG00000271155 ZNF510 LOC158435 ENSG00000271659 GC09P095906
GH09I095879 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -24.9 -24899 1.5 GATA3 PRDM6 RFX1 JUN CREB1 FOS ELF1 BMI1 ATF2 FOXA1 ERCC6L2 LINC00476 PTCH1 GC09P095906
GH09I095887 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -16.8 -16809 1.4 ZNF529 RUNX3 LINC00476 ZNF510 ENSG00000271659 RNU2-46P PTCH1 ERCC6L2 GC09P095906
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09P095906 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09P095906 Gene

Genomic Locations for GC09P095906 Gene
117 bases
Plus strand

Genomic View for GC09P095906 Gene

Genes around GC09P095906 on UCSC Golden Path with GeneCards custom track

GC09P095906 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P095906 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P095906 Gene

Proteins for GC09P095906 Gene

Post-translational modifications for GC09P095906 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P095906 Gene

Domains & Families for GC09P095906 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P095906 Gene

Function for GC09P095906 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P095906 Gene

Localization for GC09P095906 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P095906 Gene

Pathways & Interactions for GC09P095906 Gene

SuperPathways for GC09P095906 Gene

No Data Available

Interacting Proteins for GC09P095906 Gene

Gene Ontology (GO) - Biological Process for GC09P095906 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09P095906 Gene

Drugs & Compounds for GC09P095906 Gene

No Compound Related Data Available

Transcripts for GC09P095906 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P095906 Gene

No ASD Table

Relevant External Links for GC09P095906 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09P095906 Gene

Expression for GC09P095906 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P095906 Gene

Orthologs for GC09P095906 Gene

No data available for Orthologs and Evolution for GC09P095906 Gene

Paralogs for GC09P095906 Gene

No data available for Paralogs for GC09P095906 Gene

Variants for GC09P095906 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09P095906 Gene

Disorders for GC09P095906 Gene

No disorders were found for GC09P095906 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P095906 Gene

Publications for GC09P095906 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

Products for GC09P095906 Gene

Sources for GC09P095906 Gene

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