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Aliases for GC09P079663 Gene

Subcategory (RNA class) for GC09P079663 Gene


Quality Score for this RNA gene is


Aliases for GC09P079663 Gene

No Aliases found

ORGUL Members for GC09P079663 Gene

No data available for External Ids for GC09P079663 Gene

Summaries for GC09P079663 Gene

GeneCards Summary for GC09P079663 Gene

GC09P079663 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09P079663 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09P079663

Additional gene information for GC09P079663 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P079663 Gene

Genomics for GC09P079663 Gene

GeneHancer (GH) Regulatory Elements for GC09P079663 Gene

Promoters and enhancers for GC09P079663 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I079659 Enhancer 1.4 VISTA Ensembl ENCODE dbSUPER 550.8 -1.9 -1903 5.2 SCRT1 MXI1 RFX1 ZNF843 SP1 GATA3 POLR2A ZNF692 SCRT2 PRDM10 GC09P079662 GC09P079663 TLE4 GC09P079610
GH09I079667 Enhancer 0.9 ENCODE dbSUPER 0.8 +4.1 4102 1.3 SOX13 FOXA2 SIN3A BRCA1 RAD21 YY1 GATA3 FOSL2 RXRA REST GC09P079663 ENSG00000240979 TLE4
GH09I079669 Enhancer 0.9 ENCODE dbSUPER 0.4 +7.3 7294 3.2 FOXA2 MAX SIN3A REST FEZF1 CEBPG FOXA1 SP1 CTBP1 ATF3 GC09P079663 ENSG00000240979 TLE4
GH09I079684 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +22.2 22194 3.8 ZBTB21 ZNF449 JUN MZF1 ZFHX2 ZNF366 PRDM10 ATF7 FOS ZNF600 TLE4 GC09P079663 ENSG00000240979
GH09I079692 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +30.2 30169 3.9 SMARCE1 EBF1 BATF BRCA1 ZNF217 CTBP1 GATA3 ATF7 MLLT1 PRDM1 TLE4 ENSG00000240979 GC09P079663
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09P079663 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09P079663 Gene

Genomic Locations for GC09P079663 Gene
352 bases
Plus strand

Genomic View for GC09P079663 Gene

Genes around GC09P079663 on UCSC Golden Path with GeneCards custom track

GC09P079663 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P079663 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P079663 Gene

ORGUL Member Location for GC09P079663 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P079663 Gene

Proteins for GC09P079663 Gene

Post-translational modifications for GC09P079663 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P079663 Gene

Domains & Families for GC09P079663 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P079663 Gene

Function for GC09P079663 Gene

Phenotypes From GWAS Catalog for GC09P079663 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09P079663 Gene

Localization for GC09P079663 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P079663 Gene

Pathways & Interactions for GC09P079663 Gene

SuperPathways for GC09P079663 Gene

No Data Available

Interacting Proteins for GC09P079663 Gene

Gene Ontology (GO) - Biological Process for GC09P079663 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09P079663 Gene

Drugs & Compounds for GC09P079663 Gene

No Compound Related Data Available

Transcripts for GC09P079663 Gene

fRNAdb Secondary structures for GC09P079663 Gene

  • FR294819
  • FR225577

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P079663 Gene

No ASD Table

Relevant External Links for GC09P079663 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09P079663 Gene

Expression for GC09P079663 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P079663 Gene

Orthologs for GC09P079663 Gene

No data available for Orthologs and Evolution for GC09P079663 Gene

Paralogs for GC09P079663 Gene

No data available for Paralogs for GC09P079663 Gene

Variants for GC09P079663 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09P079663 Gene

Disorders for GC09P079663 Gene

No disorders were found for GC09P079663 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P079663 Gene

Publications for GC09P079663 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC09P079663 Gene

Sources for GC09P079663 Gene

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