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Aliases for GC09P004850 Gene

Subcategory (RNA class) for GC09P004850 Gene


Quality Score for this RNA gene is


Aliases for GC09P004850 Gene

No Aliases found

ORGUL Members for GC09P004850 Gene

No data available for External Ids for GC09P004850 Gene

Summaries for GC09P004850 Gene

GeneCards Summary for GC09P004850 Gene

GC09P004850 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09P004850 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09P004850

Additional gene information for GC09P004850 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09P004850 Gene

Genomics for GC09P004850 Gene

GeneHancer (GH) Regulatory Elements for GC09P004850 Gene

Promoters and enhancers for GC09P004850 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J004848 Enhancer 1.2 Ensembl ENCODE dbSUPER 650.7 0.0 -30 2.7 ELF3 SOX13 CTCF FOXA2 ZIC2 RAD21 RARA YY1 TEAD3 HNF4G ENSG00000228165 GC09P004850 GC09P004851 GC09P004853 MIR101-2 JAK2 RCL1 KLF4P1 GC09M004845
GH09J004851 Enhancer 0.3 ENCODE 650.7 +1.5 1519 0.2 TRIM28 ENSG00000228165 GC09P004850 GC09P004851 GC09P004853 MIR101-2 PIR61723 RCL1 GC09M004845
GH09J004828 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -18.4 -18369 6.6 ATF1 PKNOX1 FOXA2 ARNT SIN3A ETS1 NCOA2 TCF12 ZFP91 FOS RCL1 JAK2 GC09P004850 KLF4P1
GH09J004839 Promoter 1.2 EPDnew 0.4 -10.5 -10528 0.1 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 TCF12 SLC30A9 ATF7 RCL1 GC09P004850 KLF4P1
GH09J004837 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -12.3 -12270 1.8 SOX13 GATAD2A FOXA2 TEAD1 ZIC2 PPARG RARA TEAD3 CEBPA SMAD4 RCL1 GC09P004850 KLF4P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09P004850 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09P004850 Gene

Genomic Locations for GC09P004850 Gene
107 bases
Plus strand

Genomic View for GC09P004850 Gene

Genes around GC09P004850 on UCSC Golden Path with GeneCards custom track

GC09P004850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09P004850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09P004850 Gene

ORGUL Member Location for GC09P004850 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09P004850 Gene

Proteins for GC09P004850 Gene

Post-translational modifications for GC09P004850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09P004850 Gene

Domains & Families for GC09P004850 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09P004850 Gene

Function for GC09P004850 Gene

Phenotypes From GWAS Catalog for GC09P004850 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC09P004850 Gene

Localization for GC09P004850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09P004850 Gene

Pathways & Interactions for GC09P004850 Gene

SuperPathways for GC09P004850 Gene

No Data Available

Interacting Proteins for GC09P004850 Gene

Gene Ontology (GO) - Biological Process for GC09P004850 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09P004850 Gene

Drugs & Compounds for GC09P004850 Gene

No Compound Related Data Available

Transcripts for GC09P004850 Gene

fRNAdb Secondary structures for GC09P004850 Gene

  • FR375846
  • FR280725

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC09P004850 Gene

No ASD Table

Relevant External Links for GC09P004850 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09P004850 Gene

Expression for GC09P004850 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09P004850 Gene

Orthologs for GC09P004850 Gene

No data available for Orthologs and Evolution for GC09P004850 Gene

Paralogs for GC09P004850 Gene

No data available for Paralogs for GC09P004850 Gene

Variants for GC09P004850 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09P004850 Gene

Disorders for GC09P004850 Gene

No disorders were found for GC09P004850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09P004850 Gene

Publications for GC09P004850 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC09P004850 Gene

Sources for GC09P004850 Gene

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