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Aliases for GC09M109197 Gene

Subcategory (RNA class) for GC09M109197 Gene


Quality Score for this RNA gene is


Aliases for GC09M109197 Gene

No Aliases found

ORGUL Members for GC09M109197 Gene

No data available for External Ids for GC09M109197 Gene

Summaries for GC09M109197 Gene

GeneCards Summary for GC09M109197 Gene

GC09M109197 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC09M109197 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC09M109197 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M109197 Gene

Genomics for GC09M109197 Gene

GeneHancer (GH) Regulatory Elements for GC09M109197 Gene

Promoters and enhancers for GC09M109197 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J109184 Enhancer 1 Ensembl ENCODE 0.4 +12.9 12874 1.1 CTCF ZNF644 KAT8 IKZF1 CEBPA IRF2 TGIF2 MBD1 ZBTB11 CREB1 FRRS1L EPB41L4B CTNNAL1 RNU6-984P GC09M109197
GH09J109192 Enhancer 0.6 ENCODE 0.7 +3.4 3393 0.2 CTCF REST RAD21 MYNN ZNF654 ZNF143 ARID4B XRCC5 GC09M109197 RNU6-984P FRRS1L EPB41L4B
GH09J109247 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.2 -55.6 -55593 7.9 ELF3 MNT CEBPG RERE MAFK TFE3 ELF1 SP1 HNF1A PPARG EPB41L4B RNU6-984P MTND2P11 GC09M109197
GH09J109180 Enhancer 0.6 Ensembl 0.4 +15.3 15308 2 CREM ZBED1 ZIC2 PKNOX1 CBFB EED RUNX3 BCL11A JUNB IRF4 FRRS1L EPB41L4B ELP1 RNU6-984P GC09M109197
GH09J109248 Enhancer 0.9 Ensembl ENCODE 0.3 -48.6 -48591 2.2 CTCF ZNF384 MAFK RAD21 PRDM10 ZNF512 REST TRIM22 SMARCA5 YY1 RNU6-984P EPB41L4B GC09M109197 MTND2P11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC09M109197 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M109197 Gene

Genomic Locations for GC09M109197 Gene
110 bases
Minus strand

Genomic View for GC09M109197 Gene

Genes around GC09M109197 on UCSC Golden Path with GeneCards custom track

GC09M109197 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M109197 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M109197 Gene

Proteins for GC09M109197 Gene

Post-translational modifications for GC09M109197 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M109197 Gene

Domains & Families for GC09M109197 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M109197 Gene

Function for GC09M109197 Gene

Phenotypes From GWAS Catalog for GC09M109197 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M109197 Gene

Localization for GC09M109197 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M109197 Gene

Pathways & Interactions for GC09M109197 Gene

PathCards logo

SuperPathways for GC09M109197 Gene

No Data Available

Interacting Proteins for GC09M109197 Gene

Gene Ontology (GO) - Biological Process for GC09M109197 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09M109197 Gene

Drugs & Compounds for GC09M109197 Gene

No Compound Related Data Available

Transcripts for GC09M109197 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M109197 Gene

No ASD Table

Relevant External Links for GC09M109197 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09M109197 Gene

Expression for GC09M109197 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M109197 Gene

Orthologs for GC09M109197 Gene

No data available for Orthologs and Evolution for GC09M109197 Gene

Paralogs for GC09M109197 Gene

No data available for Paralogs for GC09M109197 Gene

Variants for GC09M109197 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M109197 Gene

Disorders for GC09M109197 Gene

No disorders were found for GC09M109197 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M109197 Gene

Publications for GC09M109197 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

No data available for External Links for GC09M109197 Gene

Products for GC09M109197 Gene

Sources for GC09M109197 Gene

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