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Aliases for GC09M108394 Gene

Subcategory (RNA class) for GC09M108394 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC09M108394 Gene

No Aliases found

ORGUL Members for GC09M108394 Gene

No data available for External Ids for GC09M108394 Gene

Summaries for GC09M108394 Gene

GeneCards Summary for GC09M108394 Gene

GC09M108394 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC09M108394 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC09M108394

Additional gene information for GC09M108394 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M108394 Gene

Genomics for GC09M108394 Gene

GeneHancer (GH) Regulatory Elements for GC09M108394 Gene

Promoters and enhancers for GC09M108394 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I108396 Enhancer 0.4 ENCODE 0.8 -2.4 -2445 1.1 ATF4 CEBPG GC09M108394 LOC105376214
GH09I108387 Enhancer 0.4 ENCODE 0.4 +6.9 6930 0.2 JUND POLR2A FOS GC09M108394 LOC105376214 PIR47942
GH09I108377 Enhancer 0.3 ENCODE 0.4 +16.6 16590 0.2 CTBP1 GC09M108394 LOC105376214 PIR47942
GH09I108333 Enhancer 0.6 ENCODE 0.2 +60.3 60318 1 GATAD2A TFE3 FOXA2 PPARG NFIL3 JUND CEBPA HNF4A ZBTB33 MIXL1 PIR47942 GC09M108394 LOC105376214
GH09I108382 Enhancer 0.2 ENCODE 0.4 +11.7 11710 0.2 GC09M108394 LOC105376214 PIR47942
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09M108394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M108394 Gene

Genomic Locations for GC09M108394 Gene
chr9:108,394,135-108,394,166
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC09M108394 Gene

Genes around GC09M108394 on UCSC Golden Path with GeneCards custom track

GC09M108394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M108394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09M108394 Gene

ORGUL Member Location for GC09M108394 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M108394 Gene

Proteins for GC09M108394 Gene

Post-translational modifications for GC09M108394 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M108394 Gene

Domains & Families for GC09M108394 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M108394 Gene

Function for GC09M108394 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M108394 Gene

Localization for GC09M108394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M108394 Gene

Pathways & Interactions for GC09M108394 Gene

SuperPathways for GC09M108394 Gene

No Data Available

Interacting Proteins for GC09M108394 Gene

Gene Ontology (GO) - Biological Process for GC09M108394 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M108394 Gene

Drugs & Compounds for GC09M108394 Gene

No Compound Related Data Available

Transcripts for GC09M108394 Gene

fRNAdb Secondary structures for GC09M108394 Gene

  • FR045636
  • FR220962

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M108394 Gene

No ASD Table

Relevant External Links for GC09M108394 Gene

GeneLoc Exon Structure for
GC09M108394

No data available for mRNA/cDNA for GC09M108394 Gene

Expression for GC09M108394 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M108394 Gene

Orthologs for GC09M108394 Gene

No data available for Orthologs and Evolution for GC09M108394 Gene

Paralogs for GC09M108394 Gene

No data available for Paralogs for GC09M108394 Gene

Variants for GC09M108394 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M108394 Gene

Disorders for GC09M108394 Gene

No disorders were found for GC09M108394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M108394 Gene

Publications for GC09M108394 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC09M108394 Gene

Sources for GC09M108394 Gene

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