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Aliases for GC09M095466 Gene

Subcategory (RNA class) for GC09M095466 Gene

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Quality Score for this RNA gene is

13.2

Aliases for GC09M095466 Gene

No Aliases found

ORGUL Members for GC09M095466 Gene

No data available for External Ids for GC09M095466 Gene

Summaries for GC09M095466 Gene

GeneCards Summary for GC09M095466 Gene

GC09M095466 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC09M095466 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC09M095466

Additional gene information for GC09M095466 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M095466 Gene

Genomics for GC09M095466 Gene

GeneHancer (GH) Regulatory Elements for GC09M095466 Gene

Promoters and enhancers for GC09M095466 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J095464 Enhancer 0.3 dbSUPER 600.7 +1.1 1108 1.7 ZNF316 GC09M095466 LOC100507346 PTCH1
GH09J095479 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -11.1 -11111 3.8 POLR2A EZH2 USF1 USF2 PTCH1 GC09M095466 ENSG00000271314
GH09J095480 Enhancer 0.9 Ensembl dbSUPER 0.4 -15.5 -15510 1.8 SP1 RELA CREM MLLT1 IKZF1 IKZF2 PKNOX1 CBFB DPF2 RUNX3 PTCH1 ENSG00000271314 GC09M095466
GH09J095486 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -20.1 -20091 1.2 SP1 RXRA GATA3 RAD21 FOXA1 MAX PTCH1 ENSG00000271314 GC09M095466
GH09J095468 Enhancer 0.5 dbSUPER 0.7 -3.0 -2960 1.4 ATF2 TAL1 ZBTB33 CBFA2T3 PTCH1 GC09M095466 LOC100507346 ENSG00000271314
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC09M095466 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M095466 Gene

Genomic Locations for GC09M095466 Gene
chr9:95,466,373-95,466,390
(GRCh38/hg38)
Size:
18 bases
Orientation:
Minus strand

Genomic View for GC09M095466 Gene

Genes around GC09M095466 on UCSC Golden Path with GeneCards custom track

GC09M095466 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M095466 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC09M095466 Gene

ORGUL Member Location for GC09M095466 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M095466 Gene

Proteins for GC09M095466 Gene

Post-translational modifications for GC09M095466 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M095466 Gene

Domains & Families for GC09M095466 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M095466 Gene

Function for GC09M095466 Gene

Phenotypes From GWAS Catalog for GC09M095466 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M095466 Gene

Localization for GC09M095466 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M095466 Gene

Pathways & Interactions for GC09M095466 Gene

PathCards logo

SuperPathways for GC09M095466 Gene

No Data Available

Interacting Proteins for GC09M095466 Gene

Gene Ontology (GO) - Biological Process for GC09M095466 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M095466 Gene

Drugs & Compounds for GC09M095466 Gene

No Compound Related Data Available

Transcripts for GC09M095466 Gene

fRNAdb Secondary structures for GC09M095466 Gene

  • FR007462

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M095466 Gene

No ASD Table

Relevant External Links for GC09M095466 Gene

GeneLoc Exon Structure for
GC09M095466

No data available for mRNA/cDNA for GC09M095466 Gene

Expression for GC09M095466 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M095466 Gene

Orthologs for GC09M095466 Gene

No data available for Orthologs and Evolution for GC09M095466 Gene

Paralogs for GC09M095466 Gene

No data available for Paralogs for GC09M095466 Gene

Variants for GC09M095466 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M095466 Gene

Disorders for GC09M095466 Gene

No disorders were found for GC09M095466 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M095466 Gene

Publications for GC09M095466 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC09M095466 Gene

Products for GC09M095466 Gene

Sources for GC09M095466 Gene

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