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Aliases for GC09M088172 Gene

Subcategory (RNA class) for GC09M088172 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC09M088172 Gene

No Aliases found

ORGUL Members for GC09M088172 Gene

No data available for External Ids for GC09M088172 Gene

Summaries for GC09M088172 Gene

GeneCards Summary for GC09M088172 Gene

GC09M088172 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC09M088172 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC09M088172 Gene

Genomics for GC09M088172 Gene

GeneHancer (GH) Regulatory Elements for GC09M088172 Gene

Promoters and enhancers for GC09M088172 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I088193 Enhancer 1 Ensembl ENCODE 550.8 -1.7 -1702 5.8 CLOCK ZBTB40 RAD21 YY1 RXRA USF2 CEBPB REST ELF1 SP1 GC09M088172 SPIN1 LOC100129340 PIR34393
GH09I088178 Enhancer 0.6 Ensembl ENCODE 0.4 +16.0 15951 0.9 KLF1 HLF CEBPA ENSG00000204429 LOC389768 GC09M088172 LOC100129202 LOC105376133
GH09I088173 Enhancer 0.7 ENCODE 0.3 +21.3 21305 0.2 CTCF TEAD4 ZNF644 RAD21 RFX5 TEAD3 ZNF143 SMC3 ZNF444 MIXL1 LOC389768 GC09M088172 LOC100129202 LOC105376133
GH09I088237 Enhancer 0.3 ENCODE 0.3 -42.6 -42615 1.7 POLR2A SPIN1 PIR34393 GC09M088172
GH09I088236 Enhancer 0.2 ENCODE 0.3 -41.4 -41421 0.1 PIR34393 GC09M088172
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC09M088172 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M088172 Gene

Genomic Locations for GC09M088172 Gene
chr9:88,172,775-88,194,906
(GRCh38/hg38)
Size:
22,132 bases
Orientation:
Minus strand

Genomic View for GC09M088172 Gene

Genes around GC09M088172 on UCSC Golden Path with GeneCards custom track

GC09M088172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M088172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M088172 Gene

Proteins for GC09M088172 Gene

Post-translational modifications for GC09M088172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M088172 Gene

Domains & Families for GC09M088172 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M088172 Gene

Function for GC09M088172 Gene

Phenotypes From GWAS Catalog for GC09M088172 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M088172 Gene

Localization for GC09M088172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M088172 Gene

Pathways & Interactions for GC09M088172 Gene

SuperPathways for GC09M088172 Gene

No Data Available

Interacting Proteins for GC09M088172 Gene

Gene Ontology (GO) - Biological Process for GC09M088172 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M088172 Gene

Drugs & Compounds for GC09M088172 Gene

No Compound Related Data Available

Transcripts for GC09M088172 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M088172 Gene

No ASD Table

Relevant External Links for GC09M088172 Gene

GeneLoc Exon Structure for
GC09M088172

No data available for mRNA/cDNA for GC09M088172 Gene

Expression for GC09M088172 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M088172 Gene

Orthologs for GC09M088172 Gene

No data available for Orthologs and Evolution for GC09M088172 Gene

Paralogs for GC09M088172 Gene

No data available for Paralogs for GC09M088172 Gene

Variants for GC09M088172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M088172 Gene

Disorders for GC09M088172 Gene

No disorders were found for GC09M088172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M088172 Gene

Publications for GC09M088172 Gene

No publications were found for GC09M088172 Gene.

Products for GC09M088172 Gene

Sources for GC09M088172 Gene

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