Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC09M070097 Gene

Subcategory (RNA class) for GC09M070097 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC09M070097 Gene

No Aliases found

ORGUL Members for GC09M070097 Gene

No data available for External Ids for GC09M070097 Gene

Summaries for GC09M070097 Gene

GeneCards Summary for GC09M070097 Gene

GC09M070097 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC09M070097 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC09M070097 Gene

Genomics for GC09M070097 Gene

GeneHancer (GH) Regulatory Elements for GC09M070097 Gene

Promoters and enhancers for GC09M070097 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J070229 Enhancer 0.5 Ensembl 600.7 -0.5 -544 1 CTCF SP1 POLR2A ZNF266 RAD21 HNF4A ZNF654 GC09M070097 MAMDC2-AS1 SMC5 PTAR1 MAMDC2 RPL24P8 SMC5-AS1
GH09J070255 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.3 -29254 5.8 CC2D1A ZFX CBFA2T2 ZNF148 NKRF POLR2A CEBPG ZNF687 AHR ZBTB7A SMC5 SMC5-AS1 MAMDC2-AS1 PTAR1 MAMDC2 RPL24P8 GC09M070097
GH09J070159 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +67.9 67856 3.4 ATF7 ATF2 GFI1B MAMDC2-AS1 MAMDC2 SMC5 RPL24P8 PIR60342 GC09M070097
GH09J070232 Enhancer 0.3 Ensembl 0.7 -3.7 -3735 0.2 GLIS1 MAMDC2-AS1 GC09M070097 SMC5-AS1
GH09J070205 Enhancer 0.4 ENCODE 0.3 +23.2 23159 0.8 NFIB ZNF217 SMARCE1 MAMDC2-AS1 SMC5 PIR46704 RPL24P8 GC09M070097 SMC5-AS1 MAMDC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC09M070097 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M070097 Gene

Genomic Locations for GC09M070097 Gene
chr9:70,097,758-70,228,966
(GRCh38/hg38)
Size:
131,209 bases
Orientation:
Minus strand

Genomic View for GC09M070097 Gene

Genes around GC09M070097 on UCSC Golden Path with GeneCards custom track

GC09M070097 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M070097 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M070097 Gene

Proteins for GC09M070097 Gene

Post-translational modifications for GC09M070097 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M070097 Gene

Domains & Families for GC09M070097 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M070097 Gene

Function for GC09M070097 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M070097 Gene

Localization for GC09M070097 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M070097 Gene

Pathways & Interactions for GC09M070097 Gene

PathCards logo

SuperPathways for GC09M070097 Gene

No Data Available

Interacting Proteins for GC09M070097 Gene

Gene Ontology (GO) - Biological Process for GC09M070097 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC09M070097 Gene

Drugs & Compounds for GC09M070097 Gene

No Compound Related Data Available

Transcripts for GC09M070097 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M070097 Gene

No ASD Table

Relevant External Links for GC09M070097 Gene

GeneLoc Exon Structure for
GC09M070097

No data available for mRNA/cDNA for GC09M070097 Gene

Expression for GC09M070097 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M070097 Gene

Orthologs for GC09M070097 Gene

No data available for Orthologs and Evolution for GC09M070097 Gene

Paralogs for GC09M070097 Gene

No data available for Paralogs for GC09M070097 Gene

Variants for GC09M070097 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M070097 Gene

Disorders for GC09M070097 Gene

No disorders were found for GC09M070097 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M070097 Gene

Publications for GC09M070097 Gene

No publications were found for GC09M070097 Gene.

No data available for External Links for GC09M070097 Gene

Products for GC09M070097 Gene

Sources for GC09M070097 Gene

Content
Loading form....