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Aliases for GC09M015777 Gene

Subcategory (RNA class) for GC09M015777 Gene


Quality Score for this RNA gene is


Aliases for GC09M015777 Gene

No Aliases found

ORGUL Members for GC09M015777 Gene

No data available for External Ids for GC09M015777 Gene

Summaries for GC09M015777 Gene

GeneCards Summary for GC09M015777 Gene

GC09M015777 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC09M015777 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC09M015777 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC09M015777 Gene

Genomics for GC09M015777 Gene

GeneHancer (GH) Regulatory Elements for GC09M015777 Gene

Promoters and enhancers for GC09M015777 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J015777 Enhancer 0.4 UCNEbase 600.7 -0.8 -840 0.2 RNU6-14P GC09M015777 GC09P015851 CCDC171
GH09J015734 Enhancer 0.8 Ensembl ENCODE 0.3 +40.8 40840 1.7 SP7 CEBPB JUN JUND EP300 STAT3 TCF7L2 USF2 ZNF366 PRDM6 CCDC171 RNU6-14P GC09M015777 GC09M015596
GH09J015696 Enhancer 0.9 Ensembl ENCODE 0.2 +78.7 78738 1.3 MAFK FOSL2 CREB1 ZNF629 ZNF692 JUN JUND FOS RFX5 DPF2 GC09M015596 RNU6-14P GC09M015777 CCDC171
GH09J015778 Enhancer 0.2 Ensembl 0.7 -2.2 -2215 0.2 CCDC171 GC09M015777 RNU6-14P GC09P015851
GH09J015722 Enhancer 0.5 Ensembl 0.2 +53.3 53285 1.2 PKNOX1 EZH2 USF1 SIN3A BACH1 USF2 CCDC171 RNU6-14P GC09M015596 GC09M015777
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC09M015777 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC09M015777 Gene

Genomic Locations for GC09M015777 Gene
107 bases
Minus strand

Genomic View for GC09M015777 Gene

Genes around GC09M015777 on UCSC Golden Path with GeneCards custom track

GC09M015777 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC09M015777 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC09M015777 Gene

Proteins for GC09M015777 Gene

Post-translational modifications for GC09M015777 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC09M015777 Gene

Domains & Families for GC09M015777 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC09M015777 Gene

Function for GC09M015777 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC09M015777 Gene

Localization for GC09M015777 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC09M015777 Gene

Pathways & Interactions for GC09M015777 Gene

PathCards logo

SuperPathways for GC09M015777 Gene

No Data Available

Interacting Proteins for GC09M015777 Gene

Gene Ontology (GO) - Biological Process for GC09M015777 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC09M015777 Gene

Drugs & Compounds for GC09M015777 Gene

No Compound Related Data Available

Transcripts for GC09M015777 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC09M015777 Gene

No ASD Table

Relevant External Links for GC09M015777 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC09M015777 Gene

Expression for GC09M015777 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC09M015777 Gene

Orthologs for GC09M015777 Gene

No data available for Orthologs and Evolution for GC09M015777 Gene

Paralogs for GC09M015777 Gene

No data available for Paralogs for GC09M015777 Gene

Variants for GC09M015777 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC09M015777 Gene

Disorders for GC09M015777 Gene

No disorders were found for GC09M015777 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC09M015777 Gene

Publications for GC09M015777 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

No data available for External Links for GC09M015777 Gene

Products for GC09M015777 Gene

Sources for GC09M015777 Gene

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