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Aliases for GC08P128221 Gene

Subcategory (RNA class) for GC08P128221 Gene

7SK RNA

Quality Score for this RNA gene is

15

Aliases for GC08P128221 Gene

No Aliases found

ORGUL Members for GC08P128221 Gene

No data available for External Ids for GC08P128221 Gene

Summaries for GC08P128221 Gene

GeneCards Summary for GC08P128221 Gene

GC08P128221 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC08P128221 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC08P128221 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P128221 Gene

Genomics for GC08P128221 Gene

GeneHancer (GH) Regulatory Elements for GC08P128221 Gene

Promoters and enhancers for GC08P128221 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J128221 Enhancer 0.7 Ensembl ENCODE 600.7 +1.6 1598 1.4 CREB1 RUNX3 ZNF207 CUX1 EBF1 GC08P128221 GC08P128222 RN7SKP226 TMEM75 MIR1204 PVT1 GC08M128187
GH08J128190 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.6 -26620 9 MTA3 ZNF652 ELF3 CEBPG RERE NFIB ZNF24 MAFK TFE3 ELF1 GC08P128172 GC08P128221 GC08M128187
GH08J128181 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -36.3 -36303 5.6 ZNF652 ELF3 CEBPG RERE NFIB NCOA3 MCM2 TFE3 RELA SP1 MYC MIR1208 MIR1207 CASC11 RNU1-106P TMEM75 RNU4-25P GC08P128172 GC08P128221 PVT1
GH08J128171 Enhancer 1.6 FANTOM5 ENCODE dbSUPER 0.3 -44.1 -44120 9.3 ZNF652 CC2D1A ELF3 CBFA2T2 MLLT1 CEBPG RERE GTF2F1 NFIB ZSCAN21 MIR1208 MIR1207 CASC11 MYC RNU4-25P GC08P128172 GC08P128221 PVT1
GH08J128204 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -14.5 -14502 4.8 IKZF1 NFRKB IKZF2 ZKSCAN1 RUNX3 ELF1 ZSCAN29 ZNF592 GATAD2B ZNF610 CASC11 MYC RNU4-25P MIR1208 MIR1204 PVT1 GC08P128221 GC08P128172 GC08M128187
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08P128221 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P128221 Gene

Genomic Locations for GC08P128221 Gene
chr8:128,220,503-128,220,803
(GRCh38/hg38)
Size:
301 bases
Orientation:
Plus strand

Genomic View for GC08P128221 Gene

Genes around GC08P128221 on UCSC Golden Path with GeneCards custom track

GC08P128221 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P128221 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P128221 Gene

Proteins for GC08P128221 Gene

Post-translational modifications for GC08P128221 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P128221 Gene

Domains & Families for GC08P128221 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P128221 Gene

Function for GC08P128221 Gene

Phenotypes From GWAS Catalog for GC08P128221 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P128221 Gene

Localization for GC08P128221 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P128221 Gene

Pathways & Interactions for GC08P128221 Gene

PathCards logo

SuperPathways for GC08P128221 Gene

No Data Available

Interacting Proteins for GC08P128221 Gene

Gene Ontology (GO) - Biological Process for GC08P128221 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P128221 Gene

Drugs & Compounds for GC08P128221 Gene

No Compound Related Data Available

Transcripts for GC08P128221 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P128221 Gene

No ASD Table

Relevant External Links for GC08P128221 Gene

GeneLoc Exon Structure for
GC08P128221

No data available for mRNA/cDNA for GC08P128221 Gene

Expression for GC08P128221 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P128221 Gene

Orthologs for GC08P128221 Gene

No data available for Orthologs and Evolution for GC08P128221 Gene

Paralogs for GC08P128221 Gene

No data available for Paralogs for GC08P128221 Gene

Variants for GC08P128221 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P128221 Gene

Disorders for GC08P128221 Gene

No disorders were found for GC08P128221 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P128221 Gene

Publications for GC08P128221 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

No data available for External Links for GC08P128221 Gene

Products for GC08P128221 Gene

Sources for GC08P128221 Gene

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