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Aliases for GC08P126672 Gene

Subcategory (RNA class) for GC08P126672 Gene

snRNA

Quality Score for this RNA gene is

15

Aliases for GC08P126672 Gene

No Aliases found

ORGUL Members for GC08P126672 Gene

No data available for External Ids for GC08P126672 Gene

Summaries for GC08P126672 Gene

GeneCards Summary for GC08P126672 Gene

GC08P126672 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC08P126672 Gene

  • U11_snRNA: U11 snRNA plays a role in splicing of the minor U12-dependent class of eukaryotic nuclear introns, similar to U1 snRNA in the major class spliceosome it base pairs to the conserved 5' splice site sequence.

Additional gene information for GC08P126672 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P126672 Gene

Genomics for GC08P126672 Gene

GeneHancer (GH) Regulatory Elements for GC08P126672 Gene

Promoters and enhancers for GC08P126672 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J126627 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -42.8 -42774 2.8 CEBPG CTBP1 DPF2 GATA3 JUND HSF1 SMARCE1 GC08P126672 ENSG00000253543 LOC105375751 PCAT1
GH08J126609 Enhancer 0.9 Ensembl ENCODE 0.2 -60.8 -60821 3.4 FOSL2 CEBPG ARID3A GATAD2B CTBP1 ESRRA CHD1 ZNF217 DPF2 CUX1 ENSG00000253543 LOC105375751 PCAT1 GC08P126672
GH08J126635 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.3 -35.9 -35920 1.6 GC08P126672 ENSG00000253543 PCAT1
GH08J126582 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.2 -88.2 -88247 1.5 CREB1 ATF1 ATF7 ATF2 JUN ENSG00000253543 LRATD2 PCAT1 LOC105375751 GC08P126672
GH08J126630 Enhancer 0.4 Ensembl dbSUPER 0.3 -40.5 -40520 0.8 GC08P126672 ENSG00000253543 LOC105375751 PCAT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08P126672 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P126672 Gene

Genomic Locations for GC08P126672 Gene
chr8:126,671,521-126,671,654
(GRCh38/hg38)
Size:
134 bases
Orientation:
Plus strand

Genomic View for GC08P126672 Gene

Genes around GC08P126672 on UCSC Golden Path with GeneCards custom track

GC08P126672 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P126672 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P126672 Gene

Proteins for GC08P126672 Gene

Post-translational modifications for GC08P126672 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P126672 Gene

Domains & Families for GC08P126672 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P126672 Gene

Function for GC08P126672 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P126672 Gene

Localization for GC08P126672 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P126672 Gene

Pathways & Interactions for GC08P126672 Gene

PathCards logo

SuperPathways for GC08P126672 Gene

No Data Available

Interacting Proteins for GC08P126672 Gene

Gene Ontology (GO) - Biological Process for GC08P126672 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P126672 Gene

Drugs & Compounds for GC08P126672 Gene

No Compound Related Data Available

Transcripts for GC08P126672 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P126672 Gene

No ASD Table

Relevant External Links for GC08P126672 Gene

GeneLoc Exon Structure for
GC08P126672

No data available for mRNA/cDNA for GC08P126672 Gene

Expression for GC08P126672 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P126672 Gene

Orthologs for GC08P126672 Gene

No data available for Orthologs and Evolution for GC08P126672 Gene

Paralogs for GC08P126672 Gene

No data available for Paralogs for GC08P126672 Gene

Variants for GC08P126672 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P126672 Gene

Disorders for GC08P126672 Gene

No disorders were found for GC08P126672 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P126672 Gene

Publications for GC08P126672 Gene

  1. Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila. (PMID: 15210936) Schneider C … Lührmann R (Proceedings of the National Academy of Sciences of the United States of America 2004) 1
  2. Additional low-abundance human small nuclear ribonucleoproteins: U11, U12, etc. (PMID: 2973606) Montzka KA … Steitz JA (Proceedings of the National Academy of Sciences of the United States of America 1988) 1

No data available for External Links for GC08P126672 Gene

Products for GC08P126672 Gene

Sources for GC08P126672 Gene

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