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Aliases for GC08P105321 Gene

Subcategory (RNA class) for GC08P105321 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC08P105321 Gene

No Aliases found

ORGUL Members for GC08P105321 Gene

No data available for External Ids for GC08P105321 Gene

Summaries for GC08P105321 Gene

GeneCards Summary for GC08P105321 Gene

GC08P105321 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P105321 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P105321

Additional gene information for GC08P105321 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P105321 Gene

Genomics for GC08P105321 Gene

GeneHancer (GH) Regulatory Elements for GC08P105321 Gene

Promoters and enhancers for GC08P105321 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I105321 Enhancer 1.9 VISTA UCNEbase Ensembl ENCODE 550.8 +0.3 308 1.5 HDGF PKNOX1 FEZF1 NCOA2 TCF12 ZNF766 GATA2 ARID2 NCOA1 MEF2D GC08P105321 GC08P105401 GC08M105157 ZFPM2
GH08I105317 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.8 -2.6 -2633 4.1 ARNT POLR2B ARID2 KLF7 NCOA1 ATF4 GMEB1 ZNF184 SMARCA4 NBN ZFPM2 GC08P105321 RPL17P32 GC08M105157
GH08I105325 Enhancer 1 UCNEbase 0.8 +4.0 3965 0.4 HDAC1 ARNT TEAD4 CEBPG CHAMP1 ZNF316 NCOR1 MAFK GATAD2A SMARCE1 GC08P105321 GC08P105401 GC08M105157 ZFPM2
GH08I105329 Enhancer 1.2 UCNEbase 0.4 +7.6 7560 0.3 HDGF PKNOX1 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 E2F8 GC08P105321 GC08P105401 GC08M105157 ZFPM2
GH08I105364 Enhancer 0.9 ENCODE 0.3 +43.5 43521 0.8 HDAC1 ARNT ZBTB40 CHAMP1 TCF12 ETV6 ATF7 ZBTB2 NCOA1 ZEB2 GC08P105401 GC08P105321 GC08M105157 ZFPM2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P105321 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P105321 Gene

Genomic Locations for GC08P105321 Gene
chr8:105,321,584-105,321,911
(GRCh38/hg38)
Size:
328 bases
Orientation:
Plus strand

Genomic View for GC08P105321 Gene

Genes around GC08P105321 on UCSC Golden Path with GeneCards custom track

GC08P105321 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P105321 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P105321 Gene

ORGUL Member Location for GC08P105321 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P105321 Gene

Proteins for GC08P105321 Gene

Post-translational modifications for GC08P105321 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P105321 Gene

Domains & Families for GC08P105321 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P105321 Gene

Function for GC08P105321 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P105321 Gene

Localization for GC08P105321 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P105321 Gene

Pathways & Interactions for GC08P105321 Gene

SuperPathways for GC08P105321 Gene

No Data Available

Interacting Proteins for GC08P105321 Gene

Gene Ontology (GO) - Biological Process for GC08P105321 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P105321 Gene

Drugs & Compounds for GC08P105321 Gene

No Compound Related Data Available

Transcripts for GC08P105321 Gene

fRNAdb Secondary structures for GC08P105321 Gene

  • FR006518
  • FR081599

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P105321 Gene

No ASD Table

Relevant External Links for GC08P105321 Gene

GeneLoc Exon Structure for
GC08P105321

No data available for mRNA/cDNA for GC08P105321 Gene

Expression for GC08P105321 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P105321 Gene

Orthologs for GC08P105321 Gene

No data available for Orthologs and Evolution for GC08P105321 Gene

Paralogs for GC08P105321 Gene

No data available for Paralogs for GC08P105321 Gene

Variants for GC08P105321 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P105321 Gene

Disorders for GC08P105321 Gene

No disorders were found for GC08P105321 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P105321 Gene

Publications for GC08P105321 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P105321 Gene

Sources for GC08P105321 Gene

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