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Aliases for GC08P093393 Gene

Subcategory (RNA class) for GC08P093393 Gene


Quality Score for this RNA gene is


Aliases for GC08P093393 Gene

No Aliases found

ORGUL Members for GC08P093393 Gene

No data available for External Ids for GC08P093393 Gene

Summaries for GC08P093393 Gene

GeneCards Summary for GC08P093393 Gene

GC08P093393 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P093393 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P093393

Additional gene information for GC08P093393 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P093393 Gene

Genomics for GC08P093393 Gene

GeneHancer (GH) Regulatory Elements for GC08P093393 Gene

Promoters and enhancers for GC08P093393 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I093397 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +5.1 5133 2.3 HDAC1 NFIB BMI1 ZNF366 ZNF207 RCOR1 NR2F2 ZNF217 ZNF512B NFIC RBM12B LINC00535 PDP1 GC08P093393 RNA5SP274
GH08I093403 Enhancer 0.9 Ensembl ENCODE 0.4 +11.4 11364 2.2 NCOA3 PKNOX1 NFIB NEUROD1 SIN3A CEBPG BMI1 ZBTB7B CTBP1 GATA3 LINC00535 GC08P093393 RNA5SP274
GH08I093360 Enhancer 1 Ensembl ENCODE 0.3 -32.3 -32287 1.1 PKNOX1 SMAD1 RB1 ZSCAN4 FEZF1 RAD21 ZNF213 ZNF366 ZNF143 RCOR1 LINC00535 LOC105375642 GC08P093393
GH08I093361 Enhancer 0.7 ENCODE 0.3 -31.6 -31641 0.2 CTCF PKNOX1 SMAD1 RB1 CEBPG RAD21 GATA3 ZNF213 ZNF143 ZNF444 LOC105375642 GC08P093393 LINC00535
GH08I093383 Enhancer 0.5 ENCODE 0.4 -9.4 -9389 1.2 ATF4 STAT1 CEBPG SP7 NR2C2 LINC00535 PDP1 GC08P093393 LOC105375642
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P093393 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P093393 Gene

Genomic Locations for GC08P093393 Gene
186 bases
Plus strand

Genomic View for GC08P093393 Gene

Genes around GC08P093393 on UCSC Golden Path with GeneCards custom track

GC08P093393 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P093393 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P093393 Gene

ORGUL Member Location for GC08P093393 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P093393 Gene

Proteins for GC08P093393 Gene

Post-translational modifications for GC08P093393 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P093393 Gene

Domains & Families for GC08P093393 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P093393 Gene

Function for GC08P093393 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P093393 Gene

Localization for GC08P093393 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P093393 Gene

Pathways & Interactions for GC08P093393 Gene

SuperPathways for GC08P093393 Gene

No Data Available

Interacting Proteins for GC08P093393 Gene

Gene Ontology (GO) - Biological Process for GC08P093393 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P093393 Gene

Drugs & Compounds for GC08P093393 Gene

No Compound Related Data Available

Transcripts for GC08P093393 Gene

fRNAdb Secondary structures for GC08P093393 Gene

  • FR373052
  • FR315158

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P093393 Gene

No ASD Table

Relevant External Links for GC08P093393 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P093393 Gene

Expression for GC08P093393 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P093393 Gene

Orthologs for GC08P093393 Gene

No data available for Orthologs and Evolution for GC08P093393 Gene

Paralogs for GC08P093393 Gene

No data available for Paralogs for GC08P093393 Gene

Variants for GC08P093393 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P093393 Gene

Disorders for GC08P093393 Gene

No disorders were found for GC08P093393 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P093393 Gene

Publications for GC08P093393 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P093393 Gene

Sources for GC08P093393 Gene

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