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Aliases for GC08P065965 Gene

Subcategory (RNA class) for GC08P065965 Gene


Quality Score for this RNA gene is


Aliases for GC08P065965 Gene

No Aliases found

ORGUL Members for GC08P065965 Gene

No data available for External Ids for GC08P065965 Gene

Summaries for GC08P065965 Gene

GeneCards Summary for GC08P065965 Gene

GC08P065965 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P065965 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P065965

Additional gene information for GC08P065965 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P065965 Gene

Genomics for GC08P065965 Gene

GeneHancer (GH) Regulatory Elements for GC08P065965 Gene

Promoters and enhancers for GC08P065965 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J065963 Enhancer 1 ENCODE dbSUPER 650.7 -0.9 -946 2.2 ZBTB21 INSM2 FEZF1 ZIC2 HIC1 ZNF335 ZNF664 CTBP1 GATA3 ZNF366 GC08P065965 DNAJC5B RRS1 RRS1-AS1 ADHFE1 MTFR1 PDE7A LINC01299 GC08M065874
GH08J065980 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.1 16141 4.1 PKNOX1 SMAD1 STAT5A BMI1 BATF KLF5 IRF4 ZNF207 ZNF143 ATF7 DNAJC5B GC08M065983 PDE7A MTFR1 LINC01299 GC08P065965 LOC105375883
GH08J065944 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.2 -15191 12.7 PKNOX1 NEUROD1 SIN3A FEZF1 ZNF2 IRF4 ZNF143 FOS DEK SP3 PDE7A MTFR1 DNAJC5B LINC01299 ENSG00000272010 RRS1 GC08P065965 GC08M065874
GH08J065972 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.1 8126 2.6 PKNOX1 KLF17 BRCA1 ZNF335 ZNF366 ZSCAN5C SCRT2 RCOR1 FOS CEBPB DNAJC5B MTFR1 LINC01299 ENSG00000272010 PDE7A GC08M065983 GC08P065965
GH08J065928 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -34.6 -34568 5.2 FOXA2 RAD21 RFX5 RCOR1 RUNX3 MIXL1 CEBPB PPARG SP1 MAFF MTFR1 LINC01299 GC08P065965 GC08M065874
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P065965 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P065965 Gene

Genomic Locations for GC08P065965 Gene
55 bases
Plus strand

Genomic View for GC08P065965 Gene

Genes around GC08P065965 on UCSC Golden Path with GeneCards custom track

GC08P065965 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P065965 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P065965 Gene

ORGUL Member Location for GC08P065965 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P065965 Gene

Proteins for GC08P065965 Gene

Post-translational modifications for GC08P065965 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P065965 Gene

Domains & Families for GC08P065965 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P065965 Gene

Function for GC08P065965 Gene

Phenotypes From GWAS Catalog for GC08P065965 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P065965 Gene

Localization for GC08P065965 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P065965 Gene

Pathways & Interactions for GC08P065965 Gene

SuperPathways for GC08P065965 Gene

No Data Available

Interacting Proteins for GC08P065965 Gene

Gene Ontology (GO) - Biological Process for GC08P065965 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P065965 Gene

Drugs & Compounds for GC08P065965 Gene

No Compound Related Data Available

Transcripts for GC08P065965 Gene

fRNAdb Secondary structures for GC08P065965 Gene

  • FR196322
  • FR178823

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P065965 Gene

No ASD Table

Relevant External Links for GC08P065965 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P065965 Gene

Expression for GC08P065965 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P065965 Gene

Orthologs for GC08P065965 Gene

No data available for Orthologs and Evolution for GC08P065965 Gene

Paralogs for GC08P065965 Gene

No data available for Paralogs for GC08P065965 Gene

Variants for GC08P065965 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P065965 Gene

Disorders for GC08P065965 Gene

No disorders were found for GC08P065965 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P065965 Gene

Publications for GC08P065965 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P065965 Gene

Sources for GC08P065965 Gene

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