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Aliases for GC08P041679 Gene

Subcategory (RNA class) for GC08P041679 Gene

miRNA

Quality Score for this RNA gene is

0

Aliases for GC08P041679 Gene

No Aliases found

ORGUL Members for GC08P041679 Gene

No data available for External Ids for GC08P041679 Gene

Summaries for GC08P041679 Gene

GeneCards Summary for GC08P041679 Gene

GC08P041679 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC08P041679 Gene - the ORGUL cluster for this gene includes several descriptions:

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for GC08P041679

Additional gene information for GC08P041679 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P041679 Gene

Genomics for GC08P041679 Gene

GeneHancer (GH) Regulatory Elements for GC08P041679 Gene

Promoters and enhancers for GC08P041679 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I041659 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.8 +2.8 2813 8.2 HDGF PKNOX1 ZSCAN4 KLF17 EBF1 ZIC2 FOSL1 ZNF121 ZFHX2 ZNF316 ANK1 GINS4 ENSG00000253389 GC08P041679 MIR486-1 MIR486-2 GC08P041740
GH08I041652 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -5.8 -5847 4.4 RING1 HLF NRF1 ZMYM3 ZFHX2 POLR2B POLR2A MYNN VEZF1 HMGN3 NKX6-3 GC08P041679 ANK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P041679 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P041679 Gene

Genomic Locations for GC08P041679 Gene
chr8:41,660,440-41,660,508
(GRCh38/hg38)
Size:
69 bases
Orientation:
Plus strand

Genomic View for GC08P041679 Gene

Genes around GC08P041679 on UCSC Golden Path with GeneCards custom track

GC08P041679 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P041679 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P041679 Gene

ORGUL Member Location for GC08P041679 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P041679 Gene

Proteins for GC08P041679 Gene

Post-translational modifications for GC08P041679 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P041679 Gene

Domains & Families for GC08P041679 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P041679 Gene

Function for GC08P041679 Gene

Phenotypes From GWAS Catalog for GC08P041679 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P041679 Gene

Localization for GC08P041679 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P041679 Gene

Pathways & Interactions for GC08P041679 Gene

SuperPathways for GC08P041679 Gene

No Data Available

Interacting Proteins for GC08P041679 Gene

Gene Ontology (GO) - Biological Process for GC08P041679 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P041679 Gene

Drugs & Compounds for GC08P041679 Gene

No Compound Related Data Available

Transcripts for GC08P041679 Gene

fRNAdb Secondary structures for GC08P041679 Gene

  • FR345784

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P041679 Gene

No ASD Table

Relevant External Links for GC08P041679 Gene

GeneLoc Exon Structure for
GC08P041679

No data available for mRNA/cDNA for GC08P041679 Gene

Expression for GC08P041679 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P041679 Gene

Orthologs for GC08P041679 Gene

No data available for Orthologs and Evolution for GC08P041679 Gene

Paralogs for GC08P041679 Gene

No data available for Paralogs for GC08P041679 Gene

Variants for GC08P041679 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P041679 Gene

Disorders for GC08P041679 Gene

No disorders were found for GC08P041679 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P041679 Gene

Publications for GC08P041679 Gene

  1. Identification of human fetal liver miRNAs by a novel method. (PMID: 15978578) Fu H … Zheng X (FEBS letters 2005) 1

Products for GC08P041679 Gene

Sources for GC08P041679 Gene

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