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Aliases for GC08P041428 Gene

Subcategory (RNA class) for GC08P041428 Gene


Quality Score for this RNA gene is


Aliases for GC08P041428 Gene

No Aliases found

ORGUL Members for GC08P041428 Gene

No data available for External Ids for GC08P041428 Gene

Summaries for GC08P041428 Gene

GeneCards Summary for GC08P041428 Gene

GC08P041428 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC08P041428 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC08P041428 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P041428 Gene

Genomics for GC08P041428 Gene

GeneHancer (GH) Regulatory Elements for GC08P041428 Gene

Promoters and enhancers for GC08P041428 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J041414 Enhancer 0.7 Ensembl ENCODE 0.4 -11.5 -11505 0.9 SP1 RXRA EGR1 POLR2A MAX GOLGA7 GC08P041428 GC08P041390
GH08J041417 Enhancer 0.4 ENCODE 0.4 -8.6 -8597 0.2 NANOG ZNF157 AP3M2 GINS4 SFRP1 GOLGA7 GC08P041428 GC08P041390
GH08J041401 Enhancer 0.3 ENCODE 0.3 -25.5 -25457 0.2 HLF SFRP1 GC08P041390 GC08P041428
GH08J041397 Enhancer 0.2 ENCODE 0.3 -29.2 -29157 0.2 GINS4 GC08P041390 GC08P041428
GH08J041392 Enhancer 0.2 ENCODE 0.3 -34.6 -34577 0.2 GC08P041390 GC08P041428
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P041428 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P041428 Gene

Genomic Locations for GC08P041428 Gene
74 bases
Plus strand

Genomic View for GC08P041428 Gene

Genes around GC08P041428 on UCSC Golden Path with GeneCards custom track

GC08P041428 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P041428 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P041428 Gene

Proteins for GC08P041428 Gene

Post-translational modifications for GC08P041428 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P041428 Gene

Domains & Families for GC08P041428 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P041428 Gene

Function for GC08P041428 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P041428 Gene

Localization for GC08P041428 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P041428 Gene

Pathways & Interactions for GC08P041428 Gene

SuperPathways for GC08P041428 Gene

No Data Available

Interacting Proteins for GC08P041428 Gene

Gene Ontology (GO) - Biological Process for GC08P041428 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P041428 Gene

Drugs & Compounds for GC08P041428 Gene

No Compound Related Data Available

Transcripts for GC08P041428 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P041428 Gene

No ASD Table

Relevant External Links for GC08P041428 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P041428 Gene

Expression for GC08P041428 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P041428 Gene

Orthologs for GC08P041428 Gene

No data available for Orthologs and Evolution for GC08P041428 Gene

Paralogs for GC08P041428 Gene

No data available for Paralogs for GC08P041428 Gene

Variants for GC08P041428 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P041428 Gene

Disorders for GC08P041428 Gene

No disorders were found for GC08P041428 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P041428 Gene

Publications for GC08P041428 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 1

Products for GC08P041428 Gene

Sources for GC08P041428 Gene

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