Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC08P037147 Gene

Subcategory (RNA class) for GC08P037147 Gene

undefined

Quality Score for this RNA gene is

13.4

Aliases for GC08P037147 Gene

No Aliases found

ORGUL Members for GC08P037147 Gene

No data available for External Ids for GC08P037147 Gene

Summaries for GC08P037147 Gene

GeneCards Summary for GC08P037147 Gene

GC08P037147 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P037147 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P037147

Additional gene information for GC08P037147 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P037147 Gene

Genomics for GC08P037147 Gene

GeneHancer (GH) Regulatory Elements for GC08P037147 Gene

Promoters and enhancers for GC08P037147 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J037141 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 650.7 -1.9 -1906 7.8 PKNOX1 FOXA2 MLX ARNT ARID4B NEUROD1 SIN3A FEZF1 ZNF2 IRF4 GC08P037147 ADGRA2 ERLIN2 GC08P037096
GH08J037150 Enhancer 0.6 ENCODE 0.7 +4.1 4063 1.5 PKNOX1 HLF CEBPB ZBTB48 NFE2 ZBTB33 TRIM28 ZBTB17 TCF7L2 GC08P037147 GC08P037236
GH08J037156 Enhancer 0.8 ENCODE dbSUPER 0.4 +9.9 9924 2.5 STAT1 PKNOX1 OVOL3 ZNF384 FEZF1 ZEB2 ATF2 ZNF335 CTBP1 PRDM6 GC08P037147 GC08P037236
GH08J037160 Enhancer 0.8 ENCODE 0.4 +13.1 13087 0.7 PKNOX1 ARNT ZNF384 FEZF1 ZIC2 BCL11B ZNF664 CTBP1 GATA3 ZNF600 GC08P037147 GC08P037236
GH08J037098 Enhancer 1.5 VISTA Ensembl ENCODE 0.2 -47.4 -47429 2.6 PKNOX1 ZSCAN4 ZNF133 FEZF1 ZNF2 ZEB1 ZNF335 ZNF366 SCRT2 EGR2 LOC105379374 ENSG00000254306 LOC105379377 ADGRA2 ERLIN2 GC08P037096 GC08P037147
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P037147 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P037147 Gene

Genomic Locations for GC08P037147 Gene
chr8:37,147,614-37,147,773
(GRCh38/hg38)
Size:
160 bases
Orientation:
Plus strand

Genomic View for GC08P037147 Gene

Genes around GC08P037147 on UCSC Golden Path with GeneCards custom track

GC08P037147 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P037147 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P037147 Gene

ORGUL Member Location for GC08P037147 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P037147 Gene

Proteins for GC08P037147 Gene

Post-translational modifications for GC08P037147 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P037147 Gene

Domains & Families for GC08P037147 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P037147 Gene

Function for GC08P037147 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P037147 Gene

Localization for GC08P037147 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P037147 Gene

Pathways & Interactions for GC08P037147 Gene

SuperPathways for GC08P037147 Gene

No Data Available

Interacting Proteins for GC08P037147 Gene

Gene Ontology (GO) - Biological Process for GC08P037147 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P037147 Gene

Drugs & Compounds for GC08P037147 Gene

No Compound Related Data Available

Transcripts for GC08P037147 Gene

fRNAdb Secondary structures for GC08P037147 Gene

  • FR268180
  • FR324645

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P037147 Gene

No ASD Table

Relevant External Links for GC08P037147 Gene

GeneLoc Exon Structure for
GC08P037147

No data available for mRNA/cDNA for GC08P037147 Gene

Expression for GC08P037147 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P037147 Gene

Orthologs for GC08P037147 Gene

No data available for Orthologs and Evolution for GC08P037147 Gene

Paralogs for GC08P037147 Gene

No data available for Paralogs for GC08P037147 Gene

Variants for GC08P037147 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P037147 Gene

Disorders for GC08P037147 Gene

No disorders were found for GC08P037147 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P037147 Gene

Publications for GC08P037147 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC08P037147 Gene

Sources for GC08P037147 Gene

Content
Loading form....