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Aliases for GC08P025990 Gene

Subcategory (RNA class) for GC08P025990 Gene


Quality Score for this RNA gene is


Aliases for GC08P025990 Gene

No Aliases found

ORGUL Members for GC08P025990 Gene

No data available for External Ids for GC08P025990 Gene

Summaries for GC08P025990 Gene

GeneCards Summary for GC08P025990 Gene

GC08P025990 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC08P025990 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC08P025990

Additional gene information for GC08P025990 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P025990 Gene

Genomics for GC08P025990 Gene

GeneHancer (GH) Regulatory Elements for GC08P025990 Gene

Promoters and enhancers for GC08P025990 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J025988 Enhancer 1 Ensembl ENCODE dbSUPER 600.7 -0.8 -835 3.6 SP7 ZNF600 ZIC2 ZSCAN4 ZSCAN5C OSR2 FEZF1 PRDM6 NANOG POU5F1 GC08P025990 EBF2 GC08M025942
GH08J025997 Enhancer 1.2 Ensembl dbSUPER 0.4 +8.1 8082 1 ZSCAN21 YY1 SP7 KLF14 PRDM1 ZNF404 MZF1 PKNOX1 ZNF488 ZBTB8A GNRH1 ENSG00000253476 EBF2 KCTD9 GC08P025990
GH08J025973 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -13.3 -13327 7 ZNF121 ZSCAN21 MZF1 ZNF600 ZIC2 ZEB2 ZNF692 MNT KLF9 ZBTB44 GC08P025990 GC08M025942 EBF2
GH08J026005 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.4 +17.8 17751 5.4 BACH1 MAFK TRIM24 ZIC2 NFE2L2 ZSCAN4 ZNF316 CEBPB SCRT2 CTCF EBF2 GC08P025990
GH08J025981 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -7.4 -7389 2.7 ZNF600 ZNF692 ZSCAN5C ZFHX2 ZFP69B GC08P025990 GC08M025942 EBF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08P025990 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P025990 Gene

Genomic Locations for GC08P025990 Gene
161 bases
Plus strand

Genomic View for GC08P025990 Gene

Genes around GC08P025990 on UCSC Golden Path with GeneCards custom track

GC08P025990 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P025990 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08P025990 Gene

ORGUL Member Location for GC08P025990 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P025990 Gene

Proteins for GC08P025990 Gene

Post-translational modifications for GC08P025990 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P025990 Gene

Domains & Families for GC08P025990 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P025990 Gene

Function for GC08P025990 Gene

Phenotypes From GWAS Catalog for GC08P025990 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P025990 Gene

Localization for GC08P025990 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P025990 Gene

Pathways & Interactions for GC08P025990 Gene

PathCards logo

SuperPathways for GC08P025990 Gene

No Data Available

Interacting Proteins for GC08P025990 Gene

Gene Ontology (GO) - Biological Process for GC08P025990 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P025990 Gene

Drugs & Compounds for GC08P025990 Gene

No Compound Related Data Available

Transcripts for GC08P025990 Gene

fRNAdb Secondary structures for GC08P025990 Gene

  • FR374746
  • FR060167

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P025990 Gene

No ASD Table

Relevant External Links for GC08P025990 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P025990 Gene

Expression for GC08P025990 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P025990 Gene

Orthologs for GC08P025990 Gene

No data available for Orthologs and Evolution for GC08P025990 Gene

Paralogs for GC08P025990 Gene

No data available for Paralogs for GC08P025990 Gene

Variants for GC08P025990 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P025990 Gene

Disorders for GC08P025990 Gene

No disorders were found for GC08P025990 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P025990 Gene

Publications for GC08P025990 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC08P025990 Gene

Products for GC08P025990 Gene

Sources for GC08P025990 Gene

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