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Aliases for GC08P018979 Gene

Subcategory (RNA class) for GC08P018979 Gene


Quality Score for this RNA gene is


Aliases for GC08P018979 Gene

No Aliases found

ORGUL Members for GC08P018979 Gene

No data available for External Ids for GC08P018979 Gene

Summaries for GC08P018979 Gene

GeneCards Summary for GC08P018979 Gene

GC08P018979 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC08P018979 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

Additional gene information for GC08P018979 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P018979 Gene

Genomics for GC08P018979 Gene

GeneHancer (GH) Regulatory Elements for GC08P018979 Gene

Promoters and enhancers for GC08P018979 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I018977 Enhancer 1.3 FANTOM5 Ensembl ENCODE 550.8 -0.8 -778 3.1 ELF3 ARID4B ZNF48 RAD21 YY1 ZNF335 ZNF366 ATF7 FOS ZNF362 ENSG00000201157 GC08P018979 PSD3 ENSG00000253335 ENSG00000278886
GH08I018973 Enhancer 0.5 ENCODE 0.8 -4.7 -4724 2.3 ZSCAN23 CEBPB SIN3A ZIC2 ENSG00000253335 ENSG00000270255 SH2D4A PSD3 GC08P018979 ENSG00000278886
GH08I018954 Enhancer 1.2 Ensembl ENCODE 0.3 -24.7 -24718 1.1 FOXA2 SIN3A FEZF1 ZNF2 BRCA1 YY1 GLIS2 ZNF213 ATF7 FOS ENSG00000270255 PSD3 ENSG00000253335 GC08P018979 ENSG00000278886
GH08I018955 Enhancer 1.1 Ensembl ENCODE 0.3 -21.5 -21542 4.3 FOXA2 SIN3A FEZF1 BRCA1 SP3 RXRA ZNF518A ZNF585B STAT3 HNF4A ENSG00000270255 PSD3 ENSG00000253335 GC08P018979 ENSG00000278886
GH08I018967 Enhancer 0.8 Ensembl ENCODE 0.4 -11.8 -11783 1.6 FOXA2 RXRA ZNF10 MAX REST FOXA1 YY1 JUND ATF3 HNF4A ENSG00000253335 ENSG00000270255 SH2D4A PSD3 GC08P018979 ENSG00000278886
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08P018979 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P018979 Gene

Genomic Locations for GC08P018979 Gene
155 bases
Plus strand

Genomic View for GC08P018979 Gene

Genes around GC08P018979 on UCSC Golden Path with GeneCards custom track

GC08P018979 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P018979 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P018979 Gene

Proteins for GC08P018979 Gene

Post-translational modifications for GC08P018979 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P018979 Gene

Domains & Families for GC08P018979 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P018979 Gene

Function for GC08P018979 Gene

Phenotypes From GWAS Catalog for GC08P018979 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P018979 Gene

Localization for GC08P018979 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P018979 Gene

Pathways & Interactions for GC08P018979 Gene

SuperPathways for GC08P018979 Gene

No Data Available

Interacting Proteins for GC08P018979 Gene

Gene Ontology (GO) - Biological Process for GC08P018979 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P018979 Gene

Drugs & Compounds for GC08P018979 Gene

No Compound Related Data Available

Transcripts for GC08P018979 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P018979 Gene

No ASD Table

Relevant External Links for GC08P018979 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P018979 Gene

Expression for GC08P018979 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P018979 Gene

Orthologs for GC08P018979 Gene

No data available for Orthologs and Evolution for GC08P018979 Gene

Paralogs for GC08P018979 Gene

No data available for Paralogs for GC08P018979 Gene

Variants for GC08P018979 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P018979 Gene

Disorders for GC08P018979 Gene

No disorders were found for GC08P018979 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P018979 Gene

Publications for GC08P018979 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 1
  2. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 1
  3. Three small nucleolar RNAs that are involved in ribosomal RNA precursor processing. (PMID: 9144174) Mishra RK … Eliceiri GL (Proceedings of the National Academy of Sciences of the United States of America 1997) 1
  4. The gene for human E2 small nucleolar RNA resides in an intron of a laminin-binding protein gene. (PMID: 8586453) Selvamurugan N … Eliceiri GL (Genomics 1995) 1

Products for GC08P018979 Gene

Sources for GC08P018979 Gene

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