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Aliases for GC08P013045 Gene

Subcategory (RNA class) for GC08P013045 Gene


Quality Score for this RNA gene is


Aliases for GC08P013045 Gene

No Aliases found

ORGUL Members for GC08P013045 Gene

No data available for External Ids for GC08P013045 Gene

Summaries for GC08P013045 Gene

GeneCards Summary for GC08P013045 Gene

GC08P013045 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC08P013045 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC08P013045 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08P013045 Gene

Genomics for GC08P013045 Gene

GeneHancer (GH) Regulatory Elements for GC08P013045 Gene

Promoters and enhancers for GC08P013045 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J013042 Enhancer 1.3 FANTOM5 Ensembl ENCODE 600.7 -0.7 -703 4.5 ELF3 CTCF YY1 CREM PRDM1 RAD21 PKNOX1 ARID2 GATAD2A REST GC08P013045 RNU6-842P TRMT9B PIR63002
GH08J013033 Enhancer 0.7 ENCODE 0.4 -10.3 -10322 0.2 CTCF ELF3 ELF1 RAD21 GLIS2 ZNF600 USF1 FOXA2 ZBTB17 SMC3 ENSG00000251468 GC08P013045 PIR63002
GH08J013027 Enhancer 0.5 Ensembl 0.4 -16.5 -16548 1.2 ZNF629 ZBTB20 EBF1 ATF7 TRMT9B ENSG00000255122 GC08P013045 PIR63002
GH08J013036 Enhancer 0.3 FANTOM5 0.4 -7.2 -7220 0.4 GC08P013045 PIR63002
GH08J013025 Enhancer 0.3 Ensembl 0.4 -18.0 -18048 1 ZMYM3 TRMT9B GC08P013045 PIR63002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08P013045 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P013045 Gene

Genomic Locations for GC08P013045 Gene
108 bases
Plus strand

Genomic View for GC08P013045 Gene

Genes around GC08P013045 on UCSC Golden Path with GeneCards custom track

GC08P013045 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P013045 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P013045 Gene

Proteins for GC08P013045 Gene

Post-translational modifications for GC08P013045 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P013045 Gene

Domains & Families for GC08P013045 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P013045 Gene

Function for GC08P013045 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P013045 Gene

Localization for GC08P013045 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P013045 Gene

Pathways & Interactions for GC08P013045 Gene

PathCards logo

SuperPathways for GC08P013045 Gene

No Data Available

Interacting Proteins for GC08P013045 Gene

Gene Ontology (GO) - Biological Process for GC08P013045 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08P013045 Gene

Drugs & Compounds for GC08P013045 Gene

No Compound Related Data Available

Transcripts for GC08P013045 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P013045 Gene

No ASD Table

Relevant External Links for GC08P013045 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08P013045 Gene

Expression for GC08P013045 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P013045 Gene

Orthologs for GC08P013045 Gene

No data available for Orthologs and Evolution for GC08P013045 Gene

Paralogs for GC08P013045 Gene

No data available for Paralogs for GC08P013045 Gene

Variants for GC08P013045 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P013045 Gene

Disorders for GC08P013045 Gene

No disorders were found for GC08P013045 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P013045 Gene

Publications for GC08P013045 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

No data available for External Links for GC08P013045 Gene

Products for GC08P013045 Gene

Sources for GC08P013045 Gene

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