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Aliases for GC08P002200 Gene

Subcategory (RNA class) for GC08P002200 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC08P002200 Gene

No Aliases found

ORGUL Members for GC08P002200 Gene

No data available for External Ids for GC08P002200 Gene

Summaries for GC08P002200 Gene

GeneCards Summary for GC08P002200 Gene

GC08P002200 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC08P002200 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08P002200 Gene

Genomics for GC08P002200 Gene

GeneHancer (GH) Regulatory Elements for GC08P002200 Gene

Promoters and enhancers for GC08P002200 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J002197 Enhancer 0.6 Ensembl dbSUPER 600.7 -1.0 -969 1.8 MAFK MAFG MAFF GC08P002200 LOC105377782 LOC105377781
GH08J002193 Enhancer 0.7 FANTOM5 ENCODE dbSUPER 0.7 -4.4 -4437 3.9 MNT MYOM2 GC08P002200 LOC105377782 LOC105377781
GH08J002181 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -17.2 -17170 3.8 MAFK TRIM24 SP1 ZNF639 CEBPG RXRA ZNF316 MNT CEBPB NFE2 CLN8 MYOM2 GC08P002200 LOC105377782 LOC105377781
GH08J002177 Enhancer 0.7 Ensembl 0.3 -21.3 -21266 1.2 CBFA2T2 SMARCA4 GMEB1 DPF2 ZNF512 LEF1 HDAC1 ETV6 EP300 SOX6 MYOM2 GC08P002200 LOC105377781 LOC105377782
GH08J002162 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -36.5 -36457 1.6 MYOM2 LOC105377781 LOC105377782 GC08P002200
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08P002200 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08P002200 Gene

Genomic Locations for GC08P002200 Gene
chr8:2,199,670-2,200,804
(GRCh38/hg38)
Size:
1,135 bases
Orientation:
Plus strand

Genomic View for GC08P002200 Gene

Genes around GC08P002200 on UCSC Golden Path with GeneCards custom track

GC08P002200 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08P002200 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08P002200 Gene

Proteins for GC08P002200 Gene

Post-translational modifications for GC08P002200 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08P002200 Gene

Domains & Families for GC08P002200 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08P002200 Gene

Function for GC08P002200 Gene

Phenotypes From GWAS Catalog for GC08P002200 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08P002200 Gene

Localization for GC08P002200 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08P002200 Gene

Pathways & Interactions for GC08P002200 Gene

PathCards logo

SuperPathways for GC08P002200 Gene

No Data Available

Interacting Proteins for GC08P002200 Gene

Gene Ontology (GO) - Biological Process for GC08P002200 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08P002200 Gene

Drugs & Compounds for GC08P002200 Gene

No Compound Related Data Available

Transcripts for GC08P002200 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08P002200 Gene

No ASD Table

Relevant External Links for GC08P002200 Gene

GeneLoc Exon Structure for
GC08P002200

No data available for mRNA/cDNA for GC08P002200 Gene

Expression for GC08P002200 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08P002200 Gene

Orthologs for GC08P002200 Gene

No data available for Orthologs and Evolution for GC08P002200 Gene

Paralogs for GC08P002200 Gene

No data available for Paralogs for GC08P002200 Gene

Variants for GC08P002200 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08P002200 Gene

Disorders for GC08P002200 Gene

No disorders were found for GC08P002200 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08P002200 Gene

Publications for GC08P002200 Gene

No publications were found for GC08P002200 Gene.

No data available for External Links for GC08P002200 Gene

Products for GC08P002200 Gene

Sources for GC08P002200 Gene

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