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Aliases for GC08M143801 Gene

Subcategory (RNA class) for GC08M143801 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC08M143801 Gene

No Aliases found

ORGUL Members for GC08M143801 Gene

No data available for External Ids for GC08M143801 Gene

Summaries for GC08M143801 Gene

GeneCards Summary for GC08M143801 Gene

GC08M143801 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC08M143801 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08M143801 Gene

Genomics for GC08M143801 Gene

GeneHancer (GH) Regulatory Elements for GC08M143801 Gene

Promoters and enhancers for GC08M143801 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J143826 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 +43.0 42964 3.7 ZFX SP1 MNT ZNF148 NKRF POLR2A ZNF687 NFIB MYC NCOA6 PUF60 RPL8 EEF1D ZNF7 ENSG00000255050 RHPN1 FAM83H-AS1 NRBP2 SCRIB GC08M143801
GH08J143840 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 +30.4 30425 3 ZFX ZNF148 NKRF POLR2A ZNF639 GLIS2 ZBTB8A NRF1 BACH1 ZNF143 NRBP2 NAPRT ENSG00000285599 GC08P143837 GC08M143801
GH08J143814 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.2 +56.4 56362 2.7 MTA3 SP1 ZFX MNT SIX5 ZNF148 NKRF POLR2A ZNF687 ZSCAN21 SCRIB VPS28 CPSF1 LRRC14 ZNF623 ZNF251 ADCK5 ZNF34 PARP10 ZNF707
GH08J143820 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.3 +48.4 48399 5.5 ELF3 MNT ZNF121 TFE3 SP1 SP5 KAT8 RXRA ZBTB8A ZBTB33 PUF60 ENSG00000181097 SCRIB GC08M143801
GH08J143836 Enhancer 0.9 Ensembl ENCODE 0.3 +35.1 35086 1 CTCF ZNF148 SP1 RAD21 RXRA ZNF740 CHD2 EGR1 YY1 SAP130 GC08P143837 MIR6845 SCRIB EPPK1 MIR661 PLEC PARP10 SPATC1 FAM83H PUF60
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M143801 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M143801 Gene

Genomic Locations for GC08M143801 Gene
chr8:143,801,114-143,871,734
(GRCh38/hg38)
Size:
70,621 bases
Orientation:
Minus strand
chr8:143,785,394-143,785,425
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC08M143801 Gene

Genes around GC08M143801 on UCSC Golden Path with GeneCards custom track

GC08M143801 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M143801 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M143801 Gene

Proteins for GC08M143801 Gene

Post-translational modifications for GC08M143801 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M143801 Gene

Domains & Families for GC08M143801 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M143801 Gene

Function for GC08M143801 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M143801 Gene

Localization for GC08M143801 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M143801 Gene

Pathways & Interactions for GC08M143801 Gene

PathCards logo

SuperPathways for GC08M143801 Gene

No Data Available

Interacting Proteins for GC08M143801 Gene

Gene Ontology (GO) - Biological Process for GC08M143801 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M143801 Gene

Drugs & Compounds for GC08M143801 Gene

No Compound Related Data Available

Transcripts for GC08M143801 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M143801 Gene

No ASD Table

Relevant External Links for GC08M143801 Gene

GeneLoc Exon Structure for
GC08M143801

No data available for mRNA/cDNA for GC08M143801 Gene

Expression for GC08M143801 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M143801 Gene

Orthologs for GC08M143801 Gene

No data available for Orthologs and Evolution for GC08M143801 Gene

Paralogs for GC08M143801 Gene

No data available for Paralogs for GC08M143801 Gene

Variants for GC08M143801 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M143801 Gene

Disorders for GC08M143801 Gene

No disorders were found for GC08M143801 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M143801 Gene

Publications for GC08M143801 Gene

No publications were found for GC08M143801 Gene.

No data available for External Links for GC08M143801 Gene

Products for GC08M143801 Gene

Sources for GC08M143801 Gene

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