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Aliases for GC08M140724 Gene

Subcategory (RNA class) for GC08M140724 Gene

miRNA

Quality Score for this RNA gene is

0

Aliases for GC08M140724 Gene

No Aliases found

ORGUL Members for GC08M140724 Gene

No data available for External Ids for GC08M140724 Gene

Summaries for GC08M140724 Gene

GeneCards Summary for GC08M140724 Gene

GC08M140724 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC08M140724 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

Additional gene information for GC08M140724 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M140724 Gene

Genomics for GC08M140724 Gene

GeneHancer (GH) Regulatory Elements for GC08M140724 Gene

Promoters and enhancers for GC08M140724 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I140721 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -0.1 -66 7.3 NEUROD1 RFX5 SCRT2 RCOR1 RUNX3 CEBPB GATAD2B NR2F2 ZNF217 MAFF GC08M140724 PTK2 AGO2 MIR151A
GH08I140716 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +6.5 6488 3.3 HDAC1 MEIS2 TEAD4 TAL1 CCNT2 TCF12 CTBP1 GATA2 EGR1 POLR2A AGO2 GC08M140724 PTK2
GH08I140693 Enhancer 1.1 ENCODE dbSUPER 0.3 +31.2 31238 0.2 HDAC1 PKNOX1 ATF1 ZBTB40 CHAMP1 TCF12 ZNF766 GATA2 ATF7 ZBTB2 MIR151A PTK2 GC08M140724 AGO2
GH08I140698 Enhancer 0.9 ENCODE dbSUPER 0.3 +25.2 25223 1.5 PKNOX1 SMAD1 RB1 EBF1 YBX1 IRF4 ATF7 ETV6 IKZF2 RUNX3 AGO2 GC08M140724 PTK2
GH08I140644 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +79.0 78959 3.5 FOXA2 JUN MAX SIN3A EBF1 POLR2A EGR1 FOSL2 FOS EZH2 AGO2 GC08M140724
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M140724 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M140724 Gene

Genomic Locations for GC08M140724 Gene
chr8:140,724,875-140,724,975
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for GC08M140724 Gene

Genes around GC08M140724 on UCSC Golden Path with GeneCards custom track

GC08M140724 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M140724 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M140724 Gene

Proteins for GC08M140724 Gene

Post-translational modifications for GC08M140724 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M140724 Gene

Domains & Families for GC08M140724 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M140724 Gene

Function for GC08M140724 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M140724 Gene

Localization for GC08M140724 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M140724 Gene

Pathways & Interactions for GC08M140724 Gene

SuperPathways for GC08M140724 Gene

No Data Available

Interacting Proteins for GC08M140724 Gene

Gene Ontology (GO) - Biological Process for GC08M140724 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M140724 Gene

Drugs & Compounds for GC08M140724 Gene

No Compound Related Data Available

Transcripts for GC08M140724 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M140724 Gene

No ASD Table

Relevant External Links for GC08M140724 Gene

GeneLoc Exon Structure for
GC08M140724

No data available for mRNA/cDNA for GC08M140724 Gene

Expression for GC08M140724 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M140724 Gene

Orthologs for GC08M140724 Gene

No data available for Orthologs and Evolution for GC08M140724 Gene

Paralogs for GC08M140724 Gene

No data available for Paralogs for GC08M140724 Gene

Variants for GC08M140724 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M140724 Gene

Disorders for GC08M140724 Gene

No disorders were found for GC08M140724 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M140724 Gene

Publications for GC08M140724 Gene

  1. Identification of clustered microRNAs using an ab initio prediction method. (PMID: 16274478) Sewer A … Zavolan M (BMC bioinformatics 2005) 1

Products for GC08M140724 Gene

Sources for GC08M140724 Gene

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