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Aliases for GC08M130220 Gene

Subcategory (RNA class) for GC08M130220 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC08M130220 Gene

No Aliases found

ORGUL Members for GC08M130220 Gene

No data available for External Ids for GC08M130220 Gene

Summaries for GC08M130220 Gene

GeneCards Summary for GC08M130220 Gene

GC08M130220 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC08M130220 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08M130220 Gene

Genomics for GC08M130220 Gene

GeneHancer (GH) Regulatory Elements for GC08M130220 Gene

Promoters and enhancers for GC08M130220 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J130244 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.3 4316 5.3 ZNF652 SP1 ZNF687 MAFK RELA CREM ZBED1 IKZF1 ZBTB33 POLR2A ASAP1 FAM49B GC08M130220 ENSG00000212342
GH08J130278 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -28.5 -28512 2 ELF3 SP1 ZNF644 IKZF1 POLR2A IKZF2 TCF7 EED EGR1 RUNX3 ASAP1 ASAP1-IT1 GC08M130220
GH08J130258 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -11.2 -11242 8.6 ELF3 MAFK SP1 ZNF644 SMARCA4 POLR2A BACH1 IKZF2 CEBPA GATAD2A ASAP1 FAM49B GC08M130220 ASAP1-IT1
GH08J130252 Enhancer 0.8 FANTOM5 ENCODE dbSUPER 0.7 -2.0 -2040 0.9 FOS ASAP1 FAM49B GC08M130220 ASAP1-IT1
GH08J130283 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.3 -33.4 -33431 1.8 CC2D1A CBFA2T2 ZNF148 BACH1 CREM MLLT1 EGR1 SMARCA4 IKZF1 GMEB1 ASAP1 FAM49B ASAP1-IT1 GC08M130220
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M130220 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M130220 Gene

Genomic Locations for GC08M130220 Gene
chr8:130,220,416-130,251,101
(GRCh38/hg38)
Size:
30,686 bases
Orientation:
Minus strand

Genomic View for GC08M130220 Gene

Genes around GC08M130220 on UCSC Golden Path with GeneCards custom track

GC08M130220 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M130220 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M130220 Gene

Proteins for GC08M130220 Gene

Post-translational modifications for GC08M130220 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M130220 Gene

Domains & Families for GC08M130220 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M130220 Gene

Function for GC08M130220 Gene

Phenotypes From GWAS Catalog for GC08M130220 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M130220 Gene

Localization for GC08M130220 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M130220 Gene

Pathways & Interactions for GC08M130220 Gene

PathCards logo

SuperPathways for GC08M130220 Gene

No Data Available

Interacting Proteins for GC08M130220 Gene

Gene Ontology (GO) - Biological Process for GC08M130220 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M130220 Gene

Drugs & Compounds for GC08M130220 Gene

No Compound Related Data Available

Transcripts for GC08M130220 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M130220 Gene

No ASD Table

Relevant External Links for GC08M130220 Gene

GeneLoc Exon Structure for
GC08M130220

No data available for mRNA/cDNA for GC08M130220 Gene

Expression for GC08M130220 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M130220 Gene

Orthologs for GC08M130220 Gene

No data available for Orthologs and Evolution for GC08M130220 Gene

Paralogs for GC08M130220 Gene

No data available for Paralogs for GC08M130220 Gene

Variants for GC08M130220 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M130220 Gene

Disorders for GC08M130220 Gene

No disorders were found for GC08M130220 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M130220 Gene

Publications for GC08M130220 Gene

No publications were found for GC08M130220 Gene.

No data available for External Links for GC08M130220 Gene

Products for GC08M130220 Gene

Sources for GC08M130220 Gene

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