Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC08M115568 Gene

Subcategory (RNA class) for GC08M115568 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC08M115568 Gene

No Aliases found

ORGUL Members for GC08M115568 Gene

No data available for External Ids for GC08M115568 Gene

Summaries for GC08M115568 Gene

GeneCards Summary for GC08M115568 Gene

GC08M115568 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC08M115568 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08M115568 Gene

Genomics for GC08M115568 Gene

GeneHancer (GH) Regulatory Elements for GC08M115568 Gene

Promoters and enhancers for GC08M115568 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J115661 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -96.8 -96827 8.7 ZFX ZNF148 MLLT1 GTF2F1 ZNF384 TRIM24 PRDM1 MZF1 ZNF639 SMARCA4 TRPS1 GC08P115738 GC08M115568
GH08J115562 Enhancer 0.7 Ensembl ENCODE 0.4 +5.0 5006 2.8 ZSCAN4 SCRT2 GATA3 PRDM6 GC08M115568 ENSG00000227170 TRPS1
GH08J115575 Enhancer 0.6 ENCODE 0.4 -7.7 -7733 2.5 PRDM1 FOSL2 ZNF600 ZSCAN5C FOS FOSL1 ZNF366 JUND JUN ZNF660 GC08M115568 GC08P115738 TRPS1
GH08J115647 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.2 -80.2 -80203 2.8 CC2D1A ZFX MLLT1 PRDM1 EGR1 SMARCA4 MTA1 GMEB1 ARID2 DPF2 TRPS1 GC08M115568 GC08P115738
GH08J115660 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.2 -91.8 -91781 1.2 NCOA3 HDGF CREB1 RFX1 CTBP1 BMI1 PKNOX1 ZNF217 DPF2 CUX1 GC08P115738 GC08M115568 TRPS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M115568 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M115568 Gene

Genomic Locations for GC08M115568 Gene
chr8:115,568,457-115,569,020
(GRCh38/hg38)
Size:
564 bases
Orientation:
Minus strand

Genomic View for GC08M115568 Gene

Genes around GC08M115568 on UCSC Golden Path with GeneCards custom track

GC08M115568 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M115568 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M115568 Gene

Proteins for GC08M115568 Gene

Post-translational modifications for GC08M115568 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M115568 Gene

Domains & Families for GC08M115568 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M115568 Gene

Function for GC08M115568 Gene

Phenotypes From GWAS Catalog for GC08M115568 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M115568 Gene

Localization for GC08M115568 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M115568 Gene

Pathways & Interactions for GC08M115568 Gene

PathCards logo

SuperPathways for GC08M115568 Gene

No Data Available

Interacting Proteins for GC08M115568 Gene

Gene Ontology (GO) - Biological Process for GC08M115568 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M115568 Gene

Drugs & Compounds for GC08M115568 Gene

No Compound Related Data Available

Transcripts for GC08M115568 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M115568 Gene

No ASD Table

Relevant External Links for GC08M115568 Gene

GeneLoc Exon Structure for
GC08M115568

No data available for mRNA/cDNA for GC08M115568 Gene

Expression for GC08M115568 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M115568 Gene

Orthologs for GC08M115568 Gene

No data available for Orthologs and Evolution for GC08M115568 Gene

Paralogs for GC08M115568 Gene

No data available for Paralogs for GC08M115568 Gene

Variants for GC08M115568 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M115568 Gene

Disorders for GC08M115568 Gene

No disorders were found for GC08M115568 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M115568 Gene

Publications for GC08M115568 Gene

No publications were found for GC08M115568 Gene.

No data available for External Links for GC08M115568 Gene

Products for GC08M115568 Gene

Sources for GC08M115568 Gene

Content
Loading form....