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Aliases for GC08M100962 Gene

Subcategory (RNA class) for GC08M100962 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC08M100962 Gene

No Aliases found

ORGUL Members for GC08M100962 Gene

No data available for External Ids for GC08M100962 Gene

Summaries for GC08M100962 Gene

GeneCards Summary for GC08M100962 Gene

GC08M100962 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC08M100962 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08M100962 Gene

Genomics for GC08M100962 Gene

GeneHancer (GH) Regulatory Elements for GC08M100962 Gene

Promoters and enhancers for GC08M100962 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I100960 Enhancer 0.5 ENCODE 0.8 +2.2 2195 0.2 USF1 POLR2A MAX POU5F1 USF2 GC08M100962 RN7SL685P GC08P100637
GH08I101002 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -40.9 -40933 2.3 PKNOX1 CLOCK ATF1 NEUROD1 TCF12 ELK1 FOS ATF7 CAVIN1 NCOA1 FLJ42969 LOC401471 GC08M100962 GC08P100637
GH08I100985 Enhancer 1.1 Ensembl ENCODE 0.3 -23.6 -23606 1.9 HDGF PKNOX1 CLOCK ARNT SIN3A ZNF766 FOS ZNF592 SNIP1 SREBF1 YWHAZ RN7SL685P RNF19A PABPC1 LOC401471 GC08M100962 GC08P100637
GH08I100993 Enhancer 0.4 ENCODE 0.3 -31.3 -31299 1.1 ESRRA IKZF1 RN7SL685P YWHAZ LOC401471 GC08M100962 GC08P100637
GH08I100988 Enhancer 0.2 ENCODE 0.3 -25.2 -25225 0.2 LOC401471 GC08M100962 GC08P100637
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M100962 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M100962 Gene

Genomic Locations for GC08M100962 Gene
chr8:100,962,936-100,963,043
(GRCh38/hg38)
Size:
108 bases
Orientation:
Minus strand

Genomic View for GC08M100962 Gene

Genes around GC08M100962 on UCSC Golden Path with GeneCards custom track

GC08M100962 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M100962 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M100962 Gene

Proteins for GC08M100962 Gene

Post-translational modifications for GC08M100962 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M100962 Gene

Domains & Families for GC08M100962 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M100962 Gene

Function for GC08M100962 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M100962 Gene

Localization for GC08M100962 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M100962 Gene

Pathways & Interactions for GC08M100962 Gene

SuperPathways for GC08M100962 Gene

No Data Available

Interacting Proteins for GC08M100962 Gene

Gene Ontology (GO) - Biological Process for GC08M100962 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M100962 Gene

Drugs & Compounds for GC08M100962 Gene

No Compound Related Data Available

Transcripts for GC08M100962 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M100962 Gene

No ASD Table

Relevant External Links for GC08M100962 Gene

GeneLoc Exon Structure for
GC08M100962

No data available for mRNA/cDNA for GC08M100962 Gene

Expression for GC08M100962 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M100962 Gene

Orthologs for GC08M100962 Gene

No data available for Orthologs and Evolution for GC08M100962 Gene

Paralogs for GC08M100962 Gene

No data available for Paralogs for GC08M100962 Gene

Variants for GC08M100962 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M100962 Gene

Disorders for GC08M100962 Gene

No disorders were found for GC08M100962 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M100962 Gene

Publications for GC08M100962 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC08M100962 Gene

Sources for GC08M100962 Gene

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