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Aliases for GC08M098043 Gene

Subcategory (RNA class) for GC08M098043 Gene


Quality Score for this RNA gene is


Aliases for GC08M098043 Gene

No Aliases found

ORGUL Members for GC08M098043 Gene

No data available for External Ids for GC08M098043 Gene

Summaries for GC08M098043 Gene

GeneCards Summary for GC08M098043 Gene

GC08M098043 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC08M098043 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

Additional gene information for GC08M098043 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M098043 Gene

Genomics for GC08M098043 Gene

GeneHancer (GH) Regulatory Elements for GC08M098043 Gene

Promoters and enhancers for GC08M098043 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J098040 Enhancer 0.3 Ensembl 600.7 +1.9 1916 0.2 POLR2A ENSG00000245970 GC08M098043 SNORA72 GC08M098007 RPL30 GC08P097993 GC08P097916
GH08J098043 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.7 -2.8 -2784 4.4 SP1 ZFX ELF3 NKRF POLR2A MLLT1 GTF2F1 ZNF687 NFRKB AHR RPL30 PIR49636 VPS13B ENSG00000245970 POP1 GC08M098043 SNORA72 GC08P097993 GC08P097916
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M098043 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M098043 Gene

Genomic Locations for GC08M098043 Gene
133 bases
Minus strand

Genomic View for GC08M098043 Gene

Genes around GC08M098043 on UCSC Golden Path with GeneCards custom track

GC08M098043 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M098043 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M098043 Gene

Proteins for GC08M098043 Gene

Post-translational modifications for GC08M098043 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M098043 Gene

Domains & Families for GC08M098043 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M098043 Gene

Function for GC08M098043 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M098043 Gene

Localization for GC08M098043 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M098043 Gene

Pathways & Interactions for GC08M098043 Gene

PathCards logo

SuperPathways for GC08M098043 Gene

No Data Available

Interacting Proteins for GC08M098043 Gene

Gene Ontology (GO) - Biological Process for GC08M098043 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M098043 Gene

Drugs & Compounds for GC08M098043 Gene

No Compound Related Data Available

Transcripts for GC08M098043 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M098043 Gene

No ASD Table

Relevant External Links for GC08M098043 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M098043 Gene

Expression for GC08M098043 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M098043 Gene

Orthologs for GC08M098043 Gene

No data available for Orthologs and Evolution for GC08M098043 Gene

Paralogs for GC08M098043 Gene

No data available for Paralogs for GC08M098043 Gene

Variants for GC08M098043 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M098043 Gene

Disorders for GC08M098043 Gene

No disorders were found for GC08M098043 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M098043 Gene

Publications for GC08M098043 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  4. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C … Bachellerie JP (Journal of molecular biology 2000) 1
  5. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J … Bakin A (Journal of molecular biology 1997) 1

No data available for External Links for GC08M098043 Gene

Products for GC08M098043 Gene

Sources for GC08M098043 Gene

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