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Aliases for GC08M089901 Gene

Subcategory (RNA class) for GC08M089901 Gene


Quality Score for this RNA gene is


Aliases for GC08M089901 Gene

No Aliases found

ORGUL Members for GC08M089901 Gene

No data available for External Ids for GC08M089901 Gene

Summaries for GC08M089901 Gene

GeneCards Summary for GC08M089901 Gene

GC08M089901 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC08M089901 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC08M089901 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M089901 Gene

Genomics for GC08M089901 Gene

GeneHancer (GH) Regulatory Elements for GC08M089901 Gene

Promoters and enhancers for GC08M089901 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I089897 Enhancer 0.7 ENCODE 0.8 +3.4 3436 0.2 MEIS2 JUN MAFG DPF2 EP300 FOSL1 JUND ZNF316 SMARCA4 TRIM24 GC08M089901 RNU6-925P ENSG00000275103
GH08I089885 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +12.7 12742 4.6 PKNOX1 FOXA2 SIN3A BRCA1 ZBTB40 RFX5 YY1 ZNF366 SCRT2 FOS RIPK2 OSGIN2 NBN LOC101929709 RNU6-925P GC08M089901 ENSG00000275103
GH08I089881 Enhancer 1 Ensembl ENCODE 0.4 +18.2 18152 2.5 FOXA2 NFIB SIN3A RAD21 RFX5 YY1 FOS RCOR1 DEK SMARCA5 LOC101929709 GC08M089901 RNU6-925P ENSG00000275103
GH08I089855 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +43.3 43272 4.6 TAL1 MAX BMI1 RFX5 CTBP1 GATA3 NCOR1 SCRT2 RCOR1 IKZF2 LOC101929709 NBN ENSG00000275103 RNU6-925P GC08M089901
GH08I089835 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +64.0 64017 2.9 HDGF BATF KLF5 IRF4 ATF7 ETV6 FOS BCLAF1 IKZF2 RUNX3 RIPK2 LOC101929709 NBN OSGIN2 ENSG00000275103 RNU6-925P GC08M089901
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M089901 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M089901 Gene

Genomic Locations for GC08M089901 Gene
105 bases
Minus strand

Genomic View for GC08M089901 Gene

Genes around GC08M089901 on UCSC Golden Path with GeneCards custom track

GC08M089901 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M089901 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M089901 Gene

Proteins for GC08M089901 Gene

Post-translational modifications for GC08M089901 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M089901 Gene

Domains & Families for GC08M089901 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M089901 Gene

Function for GC08M089901 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M089901 Gene

Localization for GC08M089901 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M089901 Gene

Pathways & Interactions for GC08M089901 Gene

SuperPathways for GC08M089901 Gene

No Data Available

Interacting Proteins for GC08M089901 Gene

Gene Ontology (GO) - Biological Process for GC08M089901 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M089901 Gene

Drugs & Compounds for GC08M089901 Gene

No Compound Related Data Available

Transcripts for GC08M089901 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M089901 Gene

No ASD Table

Relevant External Links for GC08M089901 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M089901 Gene

Expression for GC08M089901 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M089901 Gene

Orthologs for GC08M089901 Gene

No data available for Orthologs and Evolution for GC08M089901 Gene

Paralogs for GC08M089901 Gene

No data available for Paralogs for GC08M089901 Gene

Variants for GC08M089901 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M089901 Gene

Disorders for GC08M089901 Gene

No disorders were found for GC08M089901 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M089901 Gene

Publications for GC08M089901 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC08M089901 Gene

Sources for GC08M089901 Gene

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