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Aliases for GC08M071877 Gene

Subcategory (RNA class) for GC08M071877 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC08M071877 Gene

No Aliases found

ORGUL Members for GC08M071877 Gene

No data available for External Ids for GC08M071877 Gene

Summaries for GC08M071877 Gene

GeneCards Summary for GC08M071877 Gene

GC08M071877 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC08M071877 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC08M071877 Gene

Genomics for GC08M071877 Gene

GeneHancer (GH) Regulatory Elements for GC08M071877 Gene

Promoters and enhancers for GC08M071877 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I072075 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.3 +43.9 43855 0.6 HDAC1 KLF1 ZNF777 ZSCAN4 ZBTB40 ZIC2 ZNF335 CTBP1 GLIS2 POLR2A TRPA1 MSC-AS1 GC08M071877 RPS20P20
GH08I072106 Enhancer 0.9 ENCODE 0.4 +11.6 11603 2.5 ATF1 PKNOX1 FOXA2 ARNT TCF12 ZNF766 ATF7 FOS SP3 NCOA1 GC08M071877 TRPA1 MSC-AS1
GH08I072155 Enhancer 0.9 Ensembl ENCODE 0.3 -36.1 -36088 0.3 CTCF ZSCAN4 BATF IRF4 RAD21 CC2D1A ARID2 SMC3 ZNF143 ZNF654 ENSG00000200191 GC08M071877 LOC105375896
GH08I072144 Enhancer 0.7 Ensembl 0.3 -25.0 -25047 0.4 HDAC1 ETV1 E4F1 CTBP1 POLR2A ETV6 ATF7 L3MBTL2 ZEB2 ELF1 GC08M071877 LOC105375896
GH08I072095 Enhancer 0.7 FANTOM5 0.3 +23.3 23257 0.2 HDAC1 NFATC3 TEAD4 TAL1 RELA TCF12 CTBP1 GATA2 NCOR1 CBFA2T2 ENSG00000200191 TRPA1 GC08M071877 MSC-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M071877 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M071877 Gene

Genomic Locations for GC08M071877 Gene
chr8:71,877,583-72,119,356
(GRCh38/hg38)
Size:
241,774 bases
Orientation:
Minus strand

Genomic View for GC08M071877 Gene

Genes around GC08M071877 on UCSC Golden Path with GeneCards custom track

GC08M071877 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M071877 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M071877 Gene

Proteins for GC08M071877 Gene

Post-translational modifications for GC08M071877 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M071877 Gene

Domains & Families for GC08M071877 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M071877 Gene

Function for GC08M071877 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M071877 Gene

Localization for GC08M071877 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M071877 Gene

Pathways & Interactions for GC08M071877 Gene

SuperPathways for GC08M071877 Gene

No Data Available

Interacting Proteins for GC08M071877 Gene

Gene Ontology (GO) - Biological Process for GC08M071877 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M071877 Gene

Drugs & Compounds for GC08M071877 Gene

No Compound Related Data Available

Transcripts for GC08M071877 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M071877 Gene

No ASD Table

Relevant External Links for GC08M071877 Gene

GeneLoc Exon Structure for
GC08M071877

No data available for mRNA/cDNA for GC08M071877 Gene

Expression for GC08M071877 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M071877 Gene

Orthologs for GC08M071877 Gene

No data available for Orthologs and Evolution for GC08M071877 Gene

Paralogs for GC08M071877 Gene

No data available for Paralogs for GC08M071877 Gene

Variants for GC08M071877 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M071877 Gene

Disorders for GC08M071877 Gene

No disorders were found for GC08M071877 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M071877 Gene

Publications for GC08M071877 Gene

No publications were found for GC08M071877 Gene.

Products for GC08M071877 Gene

Sources for GC08M071877 Gene

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