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Aliases for GC08M071816 Gene

Subcategory (RNA class) for GC08M071816 Gene


Quality Score for this RNA gene is


Aliases for GC08M071816 Gene

No Aliases found

ORGUL Members for GC08M071816 Gene

No data available for External Ids for GC08M071816 Gene

Summaries for GC08M071816 Gene

GeneCards Summary for GC08M071816 Gene

GC08M071816 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC08M071816 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC08M071816 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M071816 Gene

Genomics for GC08M071816 Gene

GeneHancer (GH) Regulatory Elements for GC08M071816 Gene

Promoters and enhancers for GC08M071816 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J071820 Enhancer 0.6 Ensembl 0.7 -4.6 -4575 0.4 CTCF RAD21 REST TRIM22 SMARCA5 TEAD1 SMC3 KLF13 ZNF654 TEAD3 ENSG00000200191 GC08M071816 MSC-AS1
GH08J071827 Enhancer 0.9 ENCODE dbSUPER 0.4 -12.5 -12496 0.2 CTCF ZNF384 RAD21 IKZF1 CREB1 IKZF2 REST EED RUNX3 ATF2 MSC-AS1 GC08M071816 ENSG00000200191
GH08J071826 Enhancer 0.2 FANTOM5 0.4 -11.0 -11017 0 MSC-AS1 ENSG00000200191 GC08M071816
GH08J071805 Enhancer 0.2 Ensembl 0.4 +10.5 10524 0.2 ENSG00000253287 GC08M071816 ENSG00000200191
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M071816 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M071816 Gene

Genomic Locations for GC08M071816 Gene
133 bases
Minus strand

Genomic View for GC08M071816 Gene

Genes around GC08M071816 on UCSC Golden Path with GeneCards custom track

GC08M071816 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M071816 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M071816 Gene

Proteins for GC08M071816 Gene

Post-translational modifications for GC08M071816 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M071816 Gene

Domains & Families for GC08M071816 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M071816 Gene

Function for GC08M071816 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M071816 Gene

Localization for GC08M071816 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M071816 Gene

Pathways & Interactions for GC08M071816 Gene

PathCards logo

SuperPathways for GC08M071816 Gene

No Data Available

Interacting Proteins for GC08M071816 Gene

Gene Ontology (GO) - Biological Process for GC08M071816 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M071816 Gene

Drugs & Compounds for GC08M071816 Gene

No Compound Related Data Available

Transcripts for GC08M071816 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M071816 Gene

No ASD Table

Relevant External Links for GC08M071816 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M071816 Gene

Expression for GC08M071816 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M071816 Gene

Orthologs for GC08M071816 Gene

No data available for Orthologs and Evolution for GC08M071816 Gene

Paralogs for GC08M071816 Gene

No data available for Paralogs for GC08M071816 Gene

Variants for GC08M071816 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M071816 Gene

Disorders for GC08M071816 Gene

No disorders were found for GC08M071816 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M071816 Gene

Publications for GC08M071816 Gene

  1. The U8 snoRNA gene family: identification and characterization of distinct, functional U8 genes in Xenopus. (PMID: 11675000) Peculis BA … McDowell K (Gene 2001) 1
  2. The sequence of the 5' end of the U8 small nucleolar RNA is critical for 5.8S and 28S rRNA maturation. (PMID: 9199304) Peculis BA (Molecular and cellular biology 1997) 1

No data available for External Links for GC08M071816 Gene

Products for GC08M071816 Gene

Sources for GC08M071816 Gene

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