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Aliases for GC08M066923 Gene

Subcategory (RNA class) for GC08M066923 Gene


Quality Score for this RNA gene is


Aliases for GC08M066923 Gene

No Aliases found

ORGUL Members for GC08M066923 Gene

No data available for External Ids for GC08M066923 Gene

Summaries for GC08M066923 Gene

GeneCards Summary for GC08M066923 Gene

GC08M066923 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC08M066923 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC08M066923 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M066923 Gene

Genomics for GC08M066923 Gene

GeneHancer (GH) Regulatory Elements for GC08M066923 Gene

Promoters and enhancers for GC08M066923 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I066921 Enhancer 0.3 ENCODE 550.8 +0.7 728 0.2 POLR2A GC08M066923 GC08M066924 SNORD87 SNHG6 MCMDC2
GH08I066922 Promoter/Enhancer 1.6 Ensembl ENCODE 0.8 -2.1 -2056 5.1 HDGF PKNOX1 CLOCK SMAD1 ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 SNHG6 ARFGEF1 C8orf44 CSPP1 TCF24 VCPIP1 GC08M066923 GC08M066924 SNORD87 MCMDC2
GH08I066917 Enhancer 1 Ensembl ENCODE 0.8 +3.2 3234 4.2 RB1 BMI1 RAD21 YY1 POLR2B ATF7 IKZF2 ZNF654 ZBTB11 NCOA1 CSPP1 COPS5 PPP1R42 TCF24 GC08M066923 MCMDC2
GH08I066870 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.2 +51.8 51786 1.3 MAX SIN3A DMAP1 RAD21 YY1 E2F1 POLR2A ZNF143 THAP11 ZNF687 MCMDC2 TCF24 GC08M066923
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M066923 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M066923 Gene

Genomic Locations for GC08M066923 Gene
77 bases
Minus strand

Genomic View for GC08M066923 Gene

Genes around GC08M066923 on UCSC Golden Path with GeneCards custom track

GC08M066923 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M066923 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M066923 Gene

Proteins for GC08M066923 Gene

Post-translational modifications for GC08M066923 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M066923 Gene

Domains & Families for GC08M066923 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M066923 Gene

Function for GC08M066923 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M066923 Gene

Localization for GC08M066923 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M066923 Gene

Pathways & Interactions for GC08M066923 Gene

SuperPathways for GC08M066923 Gene

No Data Available

Interacting Proteins for GC08M066923 Gene

Gene Ontology (GO) - Biological Process for GC08M066923 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M066923 Gene

Drugs & Compounds for GC08M066923 Gene

No Compound Related Data Available

Transcripts for GC08M066923 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M066923 Gene

No ASD Table

Relevant External Links for GC08M066923 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M066923 Gene

Expression for GC08M066923 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M066923 Gene

Orthologs for GC08M066923 Gene

No data available for Orthologs and Evolution for GC08M066923 Gene

Paralogs for GC08M066923 Gene

No data available for Paralogs for GC08M066923 Gene

Variants for GC08M066923 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M066923 Gene

Disorders for GC08M066923 Gene

No disorders were found for GC08M066923 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M066923 Gene

Publications for GC08M066923 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs. (PMID: 12032087) Darzacq X … Kiss T (The EMBO journal 2002) 1
  4. U87 RNA, a novel C/D box small nucleolar RNA from mammalian cells. (PMID: 12119114) Gogolevskaya IK … Kramerov DA (Gene 2002) 1
  5. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 1

Products for GC08M066923 Gene

Sources for GC08M066923 Gene

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