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Aliases for GC08M026683 Gene

Subcategory (RNA class) for GC08M026683 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for GC08M026683 Gene

No Aliases found

ORGUL Members for GC08M026683 Gene

No data available for External Ids for GC08M026683 Gene

Summaries for GC08M026683 Gene

GeneCards Summary for GC08M026683 Gene

GC08M026683 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC08M026683 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC08M026683

Additional gene information for GC08M026683 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M026683 Gene

Genomics for GC08M026683 Gene

GeneHancer (GH) Regulatory Elements for GC08M026683 Gene

Promoters and enhancers for GC08M026683 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J026634 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +44.9 44889 9.6 ZFX SP1 ELF3 MNT MLLT1 CEBPG RERE TFE3 TRIM24 HNF1A DPYSL2 PNMA2 GC08M026683 ENSG00000253208 PSME2P5
GH08J026658 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +25.0 24997 3 ELF3 CEBPG RERE TFE3 PPARG SP5 KAT8 HMG20B RFX1 ZIC2 PNMA2 DPYSL2 GC08M026683 ENSG00000253208 PSME2P5
GH08J026661 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +21.3 21346 2.4 CC2D1A CTCF PPARG RAD21 IKZF1 GATAD2A ZNF143 REST PKNOX1 TRIM22 DPYSL2 GC08M026683 ENSG00000253208 PSME2P5
GH08J026671 Enhancer 0.9 Ensembl ENCODE 0.4 +12.9 12946 0.8 CTCF RAD21 CEBPA ZNF143 REST PKNOX1 TRIM22 ZSCAN29 ELF1 GABPA GC08M026683 ENSG00000253208 PSME2P5
GH08J026690 Enhancer 0.8 Ensembl ENCODE 0.4 -7.1 -7115 1.1 CTCF RAD21 ZNF143 REST TRIM22 SMC3 ZNF335 ZNF654 ZNF660 MAFK DPYSL2 GC08M026683 ENSG00000240519
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M026683 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M026683 Gene

Genomic Locations for GC08M026683 Gene
chr8:26,683,715-26,683,747
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand

Genomic View for GC08M026683 Gene

Genes around GC08M026683 on UCSC Golden Path with GeneCards custom track

GC08M026683 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M026683 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08M026683 Gene

ORGUL Member Location for GC08M026683 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M026683 Gene

Proteins for GC08M026683 Gene

Post-translational modifications for GC08M026683 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M026683 Gene

Domains & Families for GC08M026683 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M026683 Gene

Function for GC08M026683 Gene

Phenotypes From GWAS Catalog for GC08M026683 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M026683 Gene

Localization for GC08M026683 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M026683 Gene

Pathways & Interactions for GC08M026683 Gene

PathCards logo

SuperPathways for GC08M026683 Gene

No Data Available

Interacting Proteins for GC08M026683 Gene

Gene Ontology (GO) - Biological Process for GC08M026683 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M026683 Gene

Drugs & Compounds for GC08M026683 Gene

No Compound Related Data Available

Transcripts for GC08M026683 Gene

fRNAdb Secondary structures for GC08M026683 Gene

  • FR370295

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M026683 Gene

No ASD Table

Relevant External Links for GC08M026683 Gene

GeneLoc Exon Structure for
GC08M026683

No data available for mRNA/cDNA for GC08M026683 Gene

Expression for GC08M026683 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M026683 Gene

Orthologs for GC08M026683 Gene

No data available for Orthologs and Evolution for GC08M026683 Gene

Paralogs for GC08M026683 Gene

No data available for Paralogs for GC08M026683 Gene

Variants for GC08M026683 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M026683 Gene

Disorders for GC08M026683 Gene

No disorders were found for GC08M026683 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M026683 Gene

Publications for GC08M026683 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC08M026683 Gene

Products for GC08M026683 Gene

Sources for GC08M026683 Gene

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