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Aliases for GC08M019958 Gene

Subcategory (RNA class) for GC08M019958 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for GC08M019958 Gene

No Aliases found

ORGUL Members for GC08M019958 Gene

No data available for External Ids for GC08M019958 Gene

Summaries for GC08M019958 Gene

GeneCards Summary for GC08M019958 Gene

GC08M019958 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC08M019958 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC08M019958 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M019958 Gene

Genomics for GC08M019958 Gene

GeneHancer (GH) Regulatory Elements for GC08M019958 Gene

Promoters and enhancers for GC08M019958 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J019962 Enhancer 0.4 ENCODE dbSUPER 600.7 -0.2 -223 0.6 GC08M019958 SLC18A1 LPL LOC105379311
GH08J019960 Enhancer 0.2 dbSUPER 600.7 +1.2 1156 0.6 GC08M019958 ENSG00000253775 GC08M019933 LPL
GH08J019958 Enhancer 0.6 dbSUPER 0.7 +3.4 3406 1.6 ZNF560 ZBTB8A PRDM12 ZNF140 ZNF623 ZBTB11 ZNF213 ZC3H11A ZFP64 ZNF781 INTS10 ENSG00000253775 GC08M019958 GC08M019933 LPL
GH08J019965 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.7 -3.1 -3054 1 SLC18A1 LPL GC08M019958 LOC105379311
GH08J019967 Enhancer 0.8 FANTOM5 Ensembl dbSUPER 0.4 -10.5 -10454 10.2 ZNF140 MAFK INTS10 ENSG00000253775 SLC18A1 ATP6V1B2 LPL GC08M019958 LOC105379311
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC08M019958 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M019958 Gene

Genomic Locations for GC08M019958 Gene
chr8:19,958,477-19,962,247
(GRCh38/hg38)
Size:
3,771 bases
Orientation:
Minus strand

Genomic View for GC08M019958 Gene

Genes around GC08M019958 on UCSC Golden Path with GeneCards custom track

GC08M019958 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M019958 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M019958 Gene

Proteins for GC08M019958 Gene

Post-translational modifications for GC08M019958 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M019958 Gene

Domains & Families for GC08M019958 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M019958 Gene

Function for GC08M019958 Gene

Phenotypes From GWAS Catalog for GC08M019958 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M019958 Gene

Localization for GC08M019958 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M019958 Gene

Pathways & Interactions for GC08M019958 Gene

PathCards logo

SuperPathways for GC08M019958 Gene

No Data Available

Interacting Proteins for GC08M019958 Gene

Gene Ontology (GO) - Biological Process for GC08M019958 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M019958 Gene

Drugs & Compounds for GC08M019958 Gene

No Compound Related Data Available

Transcripts for GC08M019958 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M019958 Gene

No ASD Table

Relevant External Links for GC08M019958 Gene

GeneLoc Exon Structure for
GC08M019958

No data available for mRNA/cDNA for GC08M019958 Gene

Expression for GC08M019958 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M019958 Gene

Orthologs for GC08M019958 Gene

No data available for Orthologs and Evolution for GC08M019958 Gene

Paralogs for GC08M019958 Gene

No data available for Paralogs for GC08M019958 Gene

Variants for GC08M019958 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M019958 Gene

Disorders for GC08M019958 Gene

No disorders were found for GC08M019958 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M019958 Gene

Publications for GC08M019958 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC08M019958 Gene

Products for GC08M019958 Gene

Sources for GC08M019958 Gene

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