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Aliases for GC08M019610 Gene

Subcategory (RNA class) for GC08M019610 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for GC08M019610 Gene

No Aliases found

No data available for External Ids for GC08M019610 Gene

Summaries for GC08M019610 Gene

GeneCards Summary for GC08M019610 Gene

GC08M019610 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC08M019610 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC08M019610

Additional gene information for GC08M019610 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M019610 Gene

Genomics for GC08M019610 Gene

GeneHancer (GH) Regulatory Elements for GC08M019610 Gene

Promoters and enhancers for GC08M019610 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J019602 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.4 +8.1 8134 0.6 CTCF MXI1 KLF1 ZSCAN4 KLF17 SIN3A KLF14 ZIC2 RAD21 ZNF335 CSGALNACT1 INTS10 GC08M019610 LOC105379308
GH08J019607 Enhancer 0.8 Ensembl ENCODE 0.7 +2.3 2341 1.8 STAT1 JUN CEBPB FEZF1 EP300 RFX5 SP1 JUND STAT3 RCOR1 CSGALNACT1 INTS10 GC08M019610 LOC105379308
GH08J019614 Enhancer 0.7 ENCODE 0.7 -4.4 -4352 1.1 BACH1 BATF IRF4 ATF7 FOSL2 FOS ETV6 IKZF2 RUNX3 CREM GC08M019610 GC08M019656 CSGALNACT1
GH08J019626 Enhancer 0.9 ENCODE dbSUPER 0.4 -16.6 -16647 1.6 JUN EBF1 GTF3C2 FOSL2 FOS MAFK STAT1 TEAD1 HLF CEBPB CSGALNACT1 PSD3 GC08M019610 GC08M019656
GH08J019577 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +31.6 31561 3.5 FOXA2 JUN MAX SIN3A GTF3C2 FOSL1 POLR2A RCOR1 FOSL2 FOS CSGALNACT1 LOC105379308 GC08M019610
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M019610 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M019610 Gene

Genomic Locations for GC08M019610 Gene
chr8:19,610,404-19,610,435
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC08M019610 Gene

Genes around GC08M019610 on UCSC Golden Path with GeneCards custom track

GC08M019610 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M019610 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC08M019610 Gene

ORGUL Member Location for GC08M019610 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M019610 Gene

Proteins for GC08M019610 Gene

Post-translational modifications for GC08M019610 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M019610 Gene

Domains & Families for GC08M019610 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M019610 Gene

Function for GC08M019610 Gene

Phenotypes From GWAS Catalog for GC08M019610 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M019610 Gene

Localization for GC08M019610 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M019610 Gene

Pathways & Interactions for GC08M019610 Gene

SuperPathways for GC08M019610 Gene

No Data Available

Interacting Proteins for GC08M019610 Gene

Gene Ontology (GO) - Biological Process for GC08M019610 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC08M019610 Gene

Drugs & Compounds for GC08M019610 Gene

No Compound Related Data Available

Transcripts for GC08M019610 Gene

fRNAdb Secondary structures for GC08M019610 Gene

  • FR224414

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M019610 Gene

No ASD Table

Relevant External Links for GC08M019610 Gene

GeneLoc Exon Structure for
GC08M019610

No data available for mRNA/cDNA for GC08M019610 Gene

Expression for GC08M019610 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M019610 Gene

Orthologs for GC08M019610 Gene

No data available for Orthologs and Evolution for GC08M019610 Gene

Paralogs for GC08M019610 Gene

No data available for Paralogs for GC08M019610 Gene

Variants for GC08M019610 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M019610 Gene

Disorders for GC08M019610 Gene

No disorders were found for GC08M019610 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M019610 Gene

Publications for GC08M019610 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC08M019610 Gene

Sources for GC08M019610 Gene

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