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Aliases for GC08M009288 Gene

Subcategory (RNA class) for GC08M009288 Gene


Quality Score for this RNA gene is


Aliases for GC08M009288 Gene

No Aliases found

ORGUL Members for GC08M009288 Gene

No data available for External Ids for GC08M009288 Gene

Summaries for GC08M009288 Gene

GeneCards Summary for GC08M009288 Gene

GC08M009288 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC08M009288 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC08M009288 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC08M009288 Gene

Genomics for GC08M009288 Gene

GeneHancer (GH) Regulatory Elements for GC08M009288 Gene

Promoters and enhancers for GC08M009288 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I009291 Enhancer 0.5 ENCODE 0.8 -4.3 -4300 0.6 HDAC1 MEIS2 HDAC2 CBFA2T3 CBFA2T2 KDM1A ENSG00000253252 MIR597 GC08M009288 RNU6-1151P LOC157273 LOC105379228
GH08I009324 Enhancer 1 Ensembl ENCODE 0.3 -37.3 -37267 1.1 FOXA2 TAF1 ETV1 MAX CEBPG RAD21 RARA YY1 HNF4G ATF7 PRAG1 LOC105379228 GC08M009288 RNU6-1151P LOC157273
GH08I009268 Enhancer 0.6 ENCODE dbSUPER 0.4 +18.2 18219 2.3 SP1 ZNF24 PRAG1 ENSG00000254153 ENSG00000253887 GC08M009288 LOC157273 RNU6-1151P
GH08I009271 Enhancer 0.6 ENCODE 0.4 +16.1 16072 0.2 ZNF639 MAFG E4F1 ZNF592 ZNF316 VEZF1 NFE2 PRDM10 MAFK EMSY ENSG00000253887 GC08M009288 RNU6-1151P LOC157273
GH08I009302 Enhancer 0.5 ENCODE 0.4 -15.7 -15711 1.1 SOX13 GATAD2A FOXA2 TEAD1 FOXA3 CBFA2T3 TEAD3 MIR597 PRAG1 GC08M009288 RNU6-1151P LOC157273 LOC105379228
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC08M009288 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC08M009288 Gene

Genomic Locations for GC08M009288 Gene
108 bases
Minus strand

Genomic View for GC08M009288 Gene

Genes around GC08M009288 on UCSC Golden Path with GeneCards custom track

GC08M009288 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC08M009288 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC08M009288 Gene

Proteins for GC08M009288 Gene

Post-translational modifications for GC08M009288 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC08M009288 Gene

Domains & Families for GC08M009288 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC08M009288 Gene

Function for GC08M009288 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC08M009288 Gene

Localization for GC08M009288 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC08M009288 Gene

Pathways & Interactions for GC08M009288 Gene

SuperPathways for GC08M009288 Gene

No Data Available

Interacting Proteins for GC08M009288 Gene

Gene Ontology (GO) - Biological Process for GC08M009288 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC08M009288 Gene

Drugs & Compounds for GC08M009288 Gene

No Compound Related Data Available

Transcripts for GC08M009288 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC08M009288 Gene

No ASD Table

Relevant External Links for GC08M009288 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC08M009288 Gene

Expression for GC08M009288 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC08M009288 Gene

Orthologs for GC08M009288 Gene

No data available for Orthologs and Evolution for GC08M009288 Gene

Paralogs for GC08M009288 Gene

No data available for Paralogs for GC08M009288 Gene

Variants for GC08M009288 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC08M009288 Gene

Disorders for GC08M009288 Gene

No disorders were found for GC08M009288 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC08M009288 Gene

Publications for GC08M009288 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC08M009288 Gene

Sources for GC08M009288 Gene

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