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Aliases for GC07P130029 Gene

Subcategory (RNA class) for GC07P130029 Gene


Quality Score for this RNA gene is


Aliases for GC07P130029 Gene

No Aliases found

ORGUL Members for GC07P130029 Gene

No data available for External Ids for GC07P130029 Gene

Summaries for GC07P130029 Gene

GeneCards Summary for GC07P130029 Gene

GC07P130029 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC07P130029 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC07P130029 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P130029 Gene

Genomics for GC07P130029 Gene

GeneHancer (GH) Regulatory Elements for GC07P130029 Gene

Promoters and enhancers for GC07P130029 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I130024 Enhancer 1.2 Ensembl ENCODE 550.8 -1.4 -1389 2.6 HDGF PKNOX1 SMAD1 ATF1 ARNT ZNF766 E2F8 ATF7 FOS KDM4B GC07P130029 RNA5SP245 ZC3HC1 ENSG00000244036 UBE2H ENSG00000199516 ENSG00000243230 GC07M129961
GH07I130008 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.4 -17.4 -17405 3.1 PKNOX1 ARNT ARID4B SIN3A IRF4 ZNF766 ZNF207 ZNF143 FOS JUNB ENSG00000199516 UBE2H TNPO3 KLHDC10 ZC3HC1 ENSG00000273319 NRF1 GC07P130029 GC07M129961 ENSG00000244036
GH07I129968 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -57.3 -57306 2.7 HDAC1 CLOCK NEUROD1 SIN3A TCF12 KLF7 FOS HCFC1 GATAD2B ELF1 GC07M129961 ENSG00000244036 GC07P130029
GH07I130020 Enhancer 0.6 ENCODE 0.4 -5.7 -5720 3 MAFF ZNF316 ZNF610 GLIS1 MAFG ZIC2 MAFK EMSY ZC3HC1 ENSG00000199516 UBE2H GC07P130029 GC07M129961 ENSG00000244036
GH07I129991 Enhancer 0.8 ENCODE 0.3 -36.7 -36720 0.2 MLX ARID4B ZSCAN9 RAD21 RARA CREM RXRA REST PPARG NR2F2 UBE2H ENSG00000199516 GC07M129961 GC07P130029 ENSG00000244036
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P130029 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P130029 Gene

Genomic Locations for GC07P130029 Gene
122 bases
Plus strand

Genomic View for GC07P130029 Gene

Genes around GC07P130029 on UCSC Golden Path with GeneCards custom track

GC07P130029 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P130029 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P130029 Gene

Proteins for GC07P130029 Gene

Post-translational modifications for GC07P130029 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P130029 Gene

Domains & Families for GC07P130029 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P130029 Gene

Function for GC07P130029 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P130029 Gene

Localization for GC07P130029 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P130029 Gene

Pathways & Interactions for GC07P130029 Gene

SuperPathways for GC07P130029 Gene

No Data Available

Interacting Proteins for GC07P130029 Gene

Gene Ontology (GO) - Biological Process for GC07P130029 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P130029 Gene

Drugs & Compounds for GC07P130029 Gene

No Compound Related Data Available

Transcripts for GC07P130029 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P130029 Gene

No ASD Table

Relevant External Links for GC07P130029 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P130029 Gene

Expression for GC07P130029 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P130029 Gene

Orthologs for GC07P130029 Gene

No data available for Orthologs and Evolution for GC07P130029 Gene

Paralogs for GC07P130029 Gene

No data available for Paralogs for GC07P130029 Gene

Variants for GC07P130029 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P130029 Gene

Disorders for GC07P130029 Gene

No disorders were found for GC07P130029 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P130029 Gene

Publications for GC07P130029 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

Products for GC07P130029 Gene

Sources for GC07P130029 Gene

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