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Aliases for GC07P129165 Gene

Subcategory (RNA class) for GC07P129165 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07P129165 Gene

No Aliases found

ORGUL Members for GC07P129165 Gene

No data available for External Ids for GC07P129165 Gene

Summaries for GC07P129165 Gene

GeneCards Summary for GC07P129165 Gene

GC07P129165 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC07P129165 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07P129165 Gene

Genomics for GC07P129165 Gene

GeneHancer (GH) Regulatory Elements for GC07P129165 Gene

Promoters and enhancers for GC07P129165 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I129164 Enhancer 0.8 ENCODE dbSUPER 550.8 -0.8 -773 0.2 CTCF ZNF654 TRIM22 REST KLF5 RAD21 KLF16 ZNF143 SMC3 BCLAF1 RNY1P11 GC07P129165 ENSG00000243230 AHCYL2 TPI1P2 TNPO3 TSPAN33
GH07I129144 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 -20.0 -19957 1.4 PKNOX1 FOXA2 ARID4B SIN3A ZNF2 GLIS2 ZNF213 ZNF143 ATF7 RUNX3 TSPAN33 GC07P129165
GH07I129150 Enhancer 1.1 ENCODE dbSUPER 0.4 -14.4 -14413 0.2 SMAD1 ARNT TCF12 ZNF766 GATA2 ATF7 NCOA1 MBD2 MEF2D GMEB1 TSPAN33 GC07P129165
GH07I129146 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -17.9 -17935 0.7 HDGF TFAP4 SMAD1 EBF1 IRF4 RELA POLR2A ATF7 IKZF2 RUNX3 TSPAN33 GC07P129165
GH07I129151 Enhancer 0.9 ENCODE dbSUPER 0.4 -14.0 -14043 0.2 LEF1 ZNF644 ZBTB40 FOSL1 ZNF766 MTA3 POLR2A VEZF1 ZNF639 ZNF263 TSPAN33 GC07P129165
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P129165 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P129165 Gene

Genomic Locations for GC07P129165 Gene
chr7:129,164,848-129,164,959
(GRCh38/hg38)
Size:
112 bases
Orientation:
Plus strand

Genomic View for GC07P129165 Gene

Genes around GC07P129165 on UCSC Golden Path with GeneCards custom track

GC07P129165 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P129165 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P129165 Gene

Proteins for GC07P129165 Gene

Post-translational modifications for GC07P129165 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P129165 Gene

Domains & Families for GC07P129165 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P129165 Gene

Function for GC07P129165 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P129165 Gene

Localization for GC07P129165 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P129165 Gene

Pathways & Interactions for GC07P129165 Gene

SuperPathways for GC07P129165 Gene

No Data Available

Interacting Proteins for GC07P129165 Gene

Gene Ontology (GO) - Biological Process for GC07P129165 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P129165 Gene

Drugs & Compounds for GC07P129165 Gene

No Compound Related Data Available

Transcripts for GC07P129165 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P129165 Gene

No ASD Table

Relevant External Links for GC07P129165 Gene

GeneLoc Exon Structure for
GC07P129165

No data available for mRNA/cDNA for GC07P129165 Gene

Expression for GC07P129165 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P129165 Gene

Orthologs for GC07P129165 Gene

No data available for Orthologs and Evolution for GC07P129165 Gene

Paralogs for GC07P129165 Gene

No data available for Paralogs for GC07P129165 Gene

Variants for GC07P129165 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P129165 Gene

Disorders for GC07P129165 Gene

No disorders were found for GC07P129165 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P129165 Gene

Publications for GC07P129165 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC07P129165 Gene

Sources for GC07P129165 Gene

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