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Aliases for GC07P102255 Gene

Subcategory (RNA class) for GC07P102255 Gene

lncRNA

Quality Score for this RNA gene is

0.2

Aliases for GC07P102255 Gene

No Aliases found

ORGUL Members for GC07P102255 Gene

No data available for External Ids for GC07P102255 Gene

Summaries for GC07P102255 Gene

GeneCards Summary for GC07P102255 Gene

GC07P102255 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC07P102255 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P102255

Additional gene information for GC07P102255 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P102255 Gene

Genomics for GC07P102255 Gene

GeneHancer (GH) Regulatory Elements for GC07P102255 Gene

Promoters and enhancers for GC07P102255 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I102252 Enhancer 0.8 ENCODE 550.8 -1.2 -1187 3.1 HDAC1 ELF3 FOXA2 RARA SLC30A9 TCF12 ZNF766 GATA2 NCOA1 KLF16 GC07P102255 POLR2J GC07P102225 CUX1
GH07I102264 Enhancer 0.7 ENCODE 0.4 +9.7 9651 0.6 HDGF NFRKB RARA YY1 FOSL1 POLR2A EGR1 VEZF1 ATF7 CREM ENSG00000278586 SH2B2 POLR2J2 ENSG00000239486 GC07P102255 GC07P102225 CUX1
GH07I102236 Enhancer 0.7 ENCODE 0.4 -18.2 -18174 0.2 CTCF RB1 ZFP64 ZIC2 ZNF2 RAD21 CC2D1A ZNF335 CTBP1 ZBTB48 SH2B2 CUX1 GC07P102225 GC07P102255
GH07I102244 Enhancer 0.6 ENCODE 0.4 -10.4 -10407 0.8 SMARCE1 SMARCA5 ZNF687 NFIB DPF2 ZBTB7B ZNF217 CTBP1 GATA3 CREB1 ORAI2 GC07P102255 GC07P102225 CUX1
GH07I102248 Enhancer 0.4 ENCODE 0.4 -6.3 -6276 0.8 CTCF SIN3A GC07P102255 GC07P102225 CUX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P102255 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P102255 Gene

Genomic Locations for GC07P102255 Gene
chr7:102,255,040-102,258,233
(GRCh38/hg38)
Size:
3,194 bases
Orientation:
Plus strand

Genomic View for GC07P102255 Gene

Genes around GC07P102255 on UCSC Golden Path with GeneCards custom track

GC07P102255 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P102255 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P102255 Gene

ORGUL Member Location for GC07P102255 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P102255 Gene

Proteins for GC07P102255 Gene

Post-translational modifications for GC07P102255 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P102255 Gene

Domains & Families for GC07P102255 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P102255 Gene

Function for GC07P102255 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P102255 Gene

Localization for GC07P102255 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P102255 Gene

Pathways & Interactions for GC07P102255 Gene

SuperPathways for GC07P102255 Gene

No Data Available

Interacting Proteins for GC07P102255 Gene

Gene Ontology (GO) - Biological Process for GC07P102255 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P102255 Gene

Drugs & Compounds for GC07P102255 Gene

No Compound Related Data Available

Transcripts for GC07P102255 Gene

fRNAdb Secondary structures for GC07P102255 Gene

  • FR386570

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P102255 Gene

No ASD Table

Relevant External Links for GC07P102255 Gene

GeneLoc Exon Structure for
GC07P102255

No data available for mRNA/cDNA for GC07P102255 Gene

Expression for GC07P102255 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P102255 Gene

Orthologs for GC07P102255 Gene

No data available for Orthologs and Evolution for GC07P102255 Gene

Paralogs for GC07P102255 Gene

No data available for Paralogs for GC07P102255 Gene

Variants for GC07P102255 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P102255 Gene

Disorders for GC07P102255 Gene

No disorders were found for GC07P102255 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P102255 Gene

Publications for GC07P102255 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC07P102255 Gene

Sources for GC07P102255 Gene

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