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Aliases for GC07P101859 Gene

Subcategory (RNA class) for GC07P101859 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC07P101859 Gene

No Aliases found

ORGUL Members for GC07P101859 Gene

No data available for External Ids for GC07P101859 Gene

Summaries for GC07P101859 Gene

GeneCards Summary for GC07P101859 Gene

GC07P101859 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P101859 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P101859

Additional gene information for GC07P101859 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P101859 Gene

Genomics for GC07P101859 Gene

GeneHancer (GH) Regulatory Elements for GC07P101859 Gene

Promoters and enhancers for GC07P101859 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I101855 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.8 -1769 4.8 CLOCK MLX FEZF1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC GC07P101859 CUX1 SRRT SH2B2 PRKRIP1 ENSG00000259294
GH07I101860 Enhancer 0.6 ENCODE dbSUPER 550.8 +1.5 1539 1.2 ZNF366 ETV6 GC07P101859 CUX1 ENSG00000272219
GH07I101861 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +3.2 3225 1.5 HDGF PKNOX1 FOXA2 FEZF1 GLIS2 ZNF548 ATF7 ZNF592 MBD2 ATF4 CUX1 SRRT ENSG00000213385 UPK3BL1 RASA4B GC07P101859 ENSG00000272219
GH07I101879 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +23.5 23497 6.3 PKNOX1 CLOCK SMAD1 FOXA2 ARNT ARID4B NEUROD1 SIN3A FEZF1 DMAP1 FAM185A IFT22 ENSG00000213385 CUX1 SH2B2 GC07P101859 ENSG00000272219
GH07I101868 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +10.7 10653 3.5 HDAC1 PKNOX1 CLOCK INSM2 SIN3A RAD21 GLIS2 EGR1 SCRT2 RCOR1 PRKRIP1 GC07P101859 CUX1 ENSG00000272219
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P101859 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P101859 Gene

Genomic Locations for GC07P101859 Gene
chr7:101,859,347-101,859,584
(GRCh38/hg38)
Size:
238 bases
Orientation:
Plus strand

Genomic View for GC07P101859 Gene

Genes around GC07P101859 on UCSC Golden Path with GeneCards custom track

GC07P101859 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P101859 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P101859 Gene

ORGUL Member Location for GC07P101859 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P101859 Gene

Proteins for GC07P101859 Gene

Post-translational modifications for GC07P101859 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P101859 Gene

Domains & Families for GC07P101859 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P101859 Gene

Function for GC07P101859 Gene

Phenotypes From GWAS Catalog for GC07P101859 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P101859 Gene

Localization for GC07P101859 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P101859 Gene

Pathways & Interactions for GC07P101859 Gene

SuperPathways for GC07P101859 Gene

No Data Available

Interacting Proteins for GC07P101859 Gene

Gene Ontology (GO) - Biological Process for GC07P101859 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P101859 Gene

Drugs & Compounds for GC07P101859 Gene

No Compound Related Data Available

Transcripts for GC07P101859 Gene

fRNAdb Secondary structures for GC07P101859 Gene

  • FR281000
  • FR226695

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P101859 Gene

No ASD Table

Relevant External Links for GC07P101859 Gene

GeneLoc Exon Structure for
GC07P101859

No data available for mRNA/cDNA for GC07P101859 Gene

Expression for GC07P101859 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P101859 Gene

Orthologs for GC07P101859 Gene

No data available for Orthologs and Evolution for GC07P101859 Gene

Paralogs for GC07P101859 Gene

No data available for Paralogs for GC07P101859 Gene

Variants for GC07P101859 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P101859 Gene

Disorders for GC07P101859 Gene

No disorders were found for GC07P101859 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P101859 Gene

Publications for GC07P101859 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC07P101859 Gene

Sources for GC07P101859 Gene

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