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Aliases for GC07P099389 Gene

Subcategory (RNA class) for GC07P099389 Gene


Quality Score for this RNA gene is


Aliases for GC07P099389 Gene

No Aliases found

ORGUL Members for GC07P099389 Gene

No data available for External Ids for GC07P099389 Gene

Summaries for GC07P099389 Gene

GeneCards Summary for GC07P099389 Gene

GC07P099389 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC07P099389 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P099389

Additional gene information for GC07P099389 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P099389 Gene

Genomics for GC07P099389 Gene

GeneHancer (GH) Regulatory Elements for GC07P099389 Gene

Promoters and enhancers for GC07P099389 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I099392 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +4.0 4044 2 HDAC1 MXI1 KLF1 USF1 ATF1 MAX BACH1 SIN3A CCNT2 CTBP1 ARPC1B ATP5MF GC07P099389 BUD31 PDAP1 ENSG00000284292
GH07I099373 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.8 -10786 9 HDGF PKNOX1 SMAD1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 ARPC1B ZSCAN25 TRRAP ZNF655 ZNF394 TRIM4 PTCD1 LOC101927550 ZNF3 STAG3L5P
GH07I099406 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 +19.5 19524 4.7 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 BUD31 PDAP1 ZSCAN25 TRIM4 SMURF1 ZNF394 ZNF3 ZNF655 ARPC1B ATP5MF
GH07I099386 Enhancer 0.7 ENCODE 0.8 -2.0 -2021 0.2 CTCF PKNOX1 USF1 ZBTB6 RB1 SAP130 ARNT ARID4B MAX ZMYM3 GC07P099389 ARPC1B ENSG00000284292
GH07I099383 Enhancer 0.6 dbSUPER 0.8 -4.6 -4581 1.1 SMARCA5 BCOR HNRNPUL1 ZNF189 ZMYM3 ZNF121 CBX1 ADNP ZNF24 KDM1A ZSCAN25 ZNF394 TRIM4 LOC100419643 SMURF1 ZNF655 ZNF3 LOC101927550 PTCD1 AP4M1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P099389 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P099389 Gene

Genomic Locations for GC07P099389 Gene
890 bases
Plus strand

Genomic View for GC07P099389 Gene

Genes around GC07P099389 on UCSC Golden Path with GeneCards custom track

GC07P099389 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P099389 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P099389 Gene

ORGUL Member Location for GC07P099389 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P099389 Gene

Proteins for GC07P099389 Gene

Post-translational modifications for GC07P099389 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P099389 Gene

Domains & Families for GC07P099389 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P099389 Gene

Function for GC07P099389 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P099389 Gene

Localization for GC07P099389 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P099389 Gene

Pathways & Interactions for GC07P099389 Gene

SuperPathways for GC07P099389 Gene

No Data Available

Interacting Proteins for GC07P099389 Gene

Gene Ontology (GO) - Biological Process for GC07P099389 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P099389 Gene

Drugs & Compounds for GC07P099389 Gene

No Compound Related Data Available

Transcripts for GC07P099389 Gene

fRNAdb Secondary structures for GC07P099389 Gene

  • FR000539

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P099389 Gene

No ASD Table

Relevant External Links for GC07P099389 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P099389 Gene

Expression for GC07P099389 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P099389 Gene

Orthologs for GC07P099389 Gene

No data available for Orthologs and Evolution for GC07P099389 Gene

Paralogs for GC07P099389 Gene

No data available for Paralogs for GC07P099389 Gene

Variants for GC07P099389 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P099389 Gene

Disorders for GC07P099389 Gene

No disorders were found for GC07P099389 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P099389 Gene

Publications for GC07P099389 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC07P099389 Gene

Sources for GC07P099389 Gene

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