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Aliases for GC07P075945 Gene

Subcategory (RNA class) for GC07P075945 Gene


Quality Score for this RNA gene is


Aliases for GC07P075945 Gene

No Aliases found

No data available for External Ids for GC07P075945 Gene

Summaries for GC07P075945 Gene

GeneCards Summary for GC07P075945 Gene

GC07P075945 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07P075945 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

View fRNAdb secondary structures for GC07P075945

Additional gene information for GC07P075945 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P075945 Gene

Genomics for GC07P075945 Gene

GeneHancer (GH) Regulatory Elements for GC07P075945 Gene

Promoters and enhancers for GC07P075945 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I075943 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.5 1513 4 FOXA2 PKNOX1 ARID4B SIN3A BRCA1 YY1 FOS ATF7 RXRA REST GC07P075945 GC07P075946 SNORA14A POR CCL24 ZP3 RHBDD2 GTF2IP1 TMEM120A GC07P075817
GH07I075931 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.9 -9933 4.5 FOXA2 SIN3A ZNF384 ZIC2 YY1 ZFHX2 FOXK2 POLR2A TRIM24 KDM4B STAG3L1 PMS2P3 POR GC07P075945 RPL7L1P3 GC07P075817
GH07I075924 Enhancer 1.1 ENCODE dbSUPER 0.4 -16.3 -16254 5.5 FOXA2 IRF4 RAD21 RARA YY1 ZNF121 SCRT2 ATF7 BCLAF1 IKZF2 MDH2 ZP3 STYXL1 RPL7L1P3 GC07P075945 POR GC07P075817
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P075945 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P075945 Gene

Genomic Locations for GC07P075945 Gene
136 bases
Plus strand

Genomic View for GC07P075945 Gene

Genes around GC07P075945 on UCSC Golden Path with GeneCards custom track

GC07P075945 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P075945 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P075945 Gene

ORGUL Member Location for GC07P075945 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P075945 Gene

Proteins for GC07P075945 Gene

Post-translational modifications for GC07P075945 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P075945 Gene

Domains & Families for GC07P075945 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P075945 Gene

Function for GC07P075945 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P075945 Gene

Localization for GC07P075945 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P075945 Gene

Pathways & Interactions for GC07P075945 Gene

SuperPathways for GC07P075945 Gene

No Data Available

Interacting Proteins for GC07P075945 Gene

Gene Ontology (GO) - Biological Process for GC07P075945 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P075945 Gene

Drugs & Compounds for GC07P075945 Gene

No Compound Related Data Available

Transcripts for GC07P075945 Gene

fRNAdb Secondary structures for GC07P075945 Gene

  • FR136247
  • FR052648

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P075945 Gene

No ASD Table

Relevant External Links for GC07P075945 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P075945 Gene

Expression for GC07P075945 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P075945 Gene

Orthologs for GC07P075945 Gene

No data available for Orthologs and Evolution for GC07P075945 Gene

Paralogs for GC07P075945 Gene

No data available for Paralogs for GC07P075945 Gene

Variants for GC07P075945 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P075945 Gene

Disorders for GC07P075945 Gene

No disorders were found for GC07P075945 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P075945 Gene

Publications for GC07P075945 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  3. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  4. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  5. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC07P075945 Gene

Sources for GC07P075945 Gene

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