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Aliases for GC07P073835 Gene

Subcategory (RNA class) for GC07P073835 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC07P073835 Gene

No Aliases found

ORGUL Members for GC07P073835 Gene

No data available for External Ids for GC07P073835 Gene

Summaries for GC07P073835 Gene

GeneCards Summary for GC07P073835 Gene

GC07P073835 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC07P073835 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC07P073835

Additional gene information for GC07P073835 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P073835 Gene

Genomics for GC07P073835 Gene

GeneHancer (GH) Regulatory Elements for GC07P073835 Gene

Promoters and enhancers for GC07P073835 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I073834 Enhancer 0.2 dbSUPER 550.8 -0.9 -926 0.5 GC07P073835 METTL27 TMEM270 VPS37D CLDN4
GH07I073841 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 +6.6 6631 1.9 HDGF PKNOX1 FOXA2 ARID4B DMAP1 ZNF48 ZNF335 POLR2B EGR1 SCRT2 METTL27 VPS37D ABHD11 GC07P073835
GH07I073825 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.4 -5.7 -5703 8.4 HDGF PKNOX1 CLOCK FOXA2 ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 CLDN4 METTL27 STAG3L3 POM121 POM121B TMEM270 NSUN5P2 BUD23 DNAJC30 NSUN5
GH07I073821 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.7 -12656 3.1 HDGF PKNOX1 CLOCK ATF1 ARNT NEUROD1 SIN3A GLIS2 CBX5 GATA2 METTL27 VPS37D ABHD11-AS1 CLDN4 CLDN3 GC07P073835
GH07I073838 Enhancer 0.7 ENCODE dbSUPER 0.8 +3.2 3227 1.1 SOX5 RCOR2 ADNP ZFP64 NR2F1 NR2F6 KDM1A METTL27 TMEM270 VPS37D GC07P073835
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P073835 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P073835 Gene

Genomic Locations for GC07P073835 Gene
chr7:73,835,640-73,835,669
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for GC07P073835 Gene

Genes around GC07P073835 on UCSC Golden Path with GeneCards custom track

GC07P073835 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P073835 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P073835 Gene

ORGUL Member Location for GC07P073835 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P073835 Gene

Proteins for GC07P073835 Gene

Post-translational modifications for GC07P073835 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P073835 Gene

Domains & Families for GC07P073835 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P073835 Gene

Function for GC07P073835 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P073835 Gene

Localization for GC07P073835 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P073835 Gene

Pathways & Interactions for GC07P073835 Gene

SuperPathways for GC07P073835 Gene

No Data Available

Interacting Proteins for GC07P073835 Gene

Gene Ontology (GO) - Biological Process for GC07P073835 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P073835 Gene

Drugs & Compounds for GC07P073835 Gene

No Compound Related Data Available

Transcripts for GC07P073835 Gene

fRNAdb Secondary structures for GC07P073835 Gene

  • FR129450
  • FR312125

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P073835 Gene

No ASD Table

Relevant External Links for GC07P073835 Gene

GeneLoc Exon Structure for
GC07P073835

No data available for mRNA/cDNA for GC07P073835 Gene

Expression for GC07P073835 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P073835 Gene

Orthologs for GC07P073835 Gene

No data available for Orthologs and Evolution for GC07P073835 Gene

Paralogs for GC07P073835 Gene

No data available for Paralogs for GC07P073835 Gene

Variants for GC07P073835 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P073835 Gene

Disorders for GC07P073835 Gene

No disorders were found for GC07P073835 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P073835 Gene

Publications for GC07P073835 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC07P073835 Gene

Sources for GC07P073835 Gene

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