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Aliases for GC07P050292 Gene

Subcategory (RNA class) for GC07P050292 Gene


Quality Score for this RNA gene is


Aliases for GC07P050292 Gene

No Aliases found

ORGUL Members for GC07P050292 Gene

No data available for External Ids for GC07P050292 Gene

Summaries for GC07P050292 Gene

GeneCards Summary for GC07P050292 Gene

GC07P050292 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P050292 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P050292

Additional gene information for GC07P050292 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P050292 Gene

Genomics for GC07P050292 Gene

GeneHancer (GH) Regulatory Elements for GC07P050292 Gene

Promoters and enhancers for GC07P050292 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I050293 Enhancer 0.8 VISTA ENCODE 550.8 +1.7 1691 1.4 PKNOX1 ZBED1 BACH1 DPF2 BATF ATF2 IRF4 RELA POLR2A BCL11A GC07P050292 ENSG00000228005 ZPBP SPATA48 IKZF1
GH07I050292 Enhancer 0.7 FANTOM5 550.8 +0.1 58 0.2 JUNB EBF1 DPF2 BATF ATF2 RELA ZNF217 BCL11A IKZF1 IKZF2 GC07P050292 IKZF1
GH07I050280 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.6 -9616 3.9 BATF KLF5 IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 SMARCA5 CBFB IKZF1 GC07P050292 ENSG00000235620
GH07I050289 Enhancer 0.2 FANTOM5 0.8 -3.0 -2997 0.2 GRB10 SPATA48 GC07P050292 ENSG00000235620
GH07I050301 Enhancer 0.4 FANTOM5 dbSUPER 0.4 +8.6 8632 0.1 ENSG00000228005 ZPBP SPATA48 IKZF1 GC07P050292
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P050292 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P050292 Gene

Genomic Locations for GC07P050292 Gene
161 bases
Plus strand

Genomic View for GC07P050292 Gene

Genes around GC07P050292 on UCSC Golden Path with GeneCards custom track

GC07P050292 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P050292 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P050292 Gene

ORGUL Member Location for GC07P050292 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P050292 Gene

Proteins for GC07P050292 Gene

Post-translational modifications for GC07P050292 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P050292 Gene

Domains & Families for GC07P050292 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P050292 Gene

Function for GC07P050292 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P050292 Gene

Localization for GC07P050292 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P050292 Gene

Pathways & Interactions for GC07P050292 Gene

SuperPathways for GC07P050292 Gene

No Data Available

Interacting Proteins for GC07P050292 Gene

Gene Ontology (GO) - Biological Process for GC07P050292 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P050292 Gene

Drugs & Compounds for GC07P050292 Gene

No Compound Related Data Available

Transcripts for GC07P050292 Gene

fRNAdb Secondary structures for GC07P050292 Gene

  • FR345024
  • FR294477

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P050292 Gene

No ASD Table

Relevant External Links for GC07P050292 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P050292 Gene

Expression for GC07P050292 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P050292 Gene

Orthologs for GC07P050292 Gene

No data available for Orthologs and Evolution for GC07P050292 Gene

Paralogs for GC07P050292 Gene

No data available for Paralogs for GC07P050292 Gene

Variants for GC07P050292 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P050292 Gene

Disorders for GC07P050292 Gene

No disorders were found for GC07P050292 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P050292 Gene

Publications for GC07P050292 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC07P050292 Gene

Sources for GC07P050292 Gene

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