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Aliases for GC07P039609 Gene

Subcategory (RNA class) for GC07P039609 Gene


Quality Score for this RNA gene is


Aliases for GC07P039609 Gene

No Aliases found

ORGUL Members for GC07P039609 Gene

No data available for External Ids for GC07P039609 Gene

Summaries for GC07P039609 Gene

GeneCards Summary for GC07P039609 Gene

GC07P039609 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC07P039609 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P039609

Additional gene information for GC07P039609 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P039609 Gene

Genomics for GC07P039609 Gene

GeneHancer (GH) Regulatory Elements for GC07P039609 Gene

Promoters and enhancers for GC07P039609 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I039607 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 550.8 -0.1 -123 4.5 HDAC1 CTCF JUN ETV1 TAL1 ZBTB40 GATA3 POLR2A RCOR1 EZH2 ENSG00000106540 ENSG00000231951 GC07P039609 LOC646999 YAE1D1 LOC105375240 RALA GC07P039582
GH07I039604 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.8 -4.1 -4087 2.5 POLR2A NR2F1 RUNX3 RALA YAE1D1 LOC105375240 GC07P039609 GC07P039582
GH07I039588 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.7 -19687 3.3 PKNOX1 SMAD1 ARNT FEZF1 IRF4 ZNF766 ZNF207 FOS JUNB REST RALA LOC105375240 YAE1D1 LINC00265 GC07P039582 GC07P039609
GH07I039591 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.6 -16563 1.9 AFF1 JUN MITF FOSL1 NFIC JUND ZNF26 PRDM10 FOS ATF7 CDK13 MPLKIP LINC00265 RALA GC07P039582 GC07P039609 YAE1D1
GH07I039594 Enhancer 0.7 ENCODE dbSUPER 0.4 -14.2 -14249 1.5 NFIC PRDM6 NFIA CAVIN1 MZF1 LINC00265 RALA GC07P039582 GC07P039609 YAE1D1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P039609 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P039609 Gene

Genomic Locations for GC07P039609 Gene
2,602 bases
Plus strand

Genomic View for GC07P039609 Gene

Genes around GC07P039609 on UCSC Golden Path with GeneCards custom track

GC07P039609 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P039609 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P039609 Gene

ORGUL Member Location for GC07P039609 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P039609 Gene

Proteins for GC07P039609 Gene

Post-translational modifications for GC07P039609 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P039609 Gene

Domains & Families for GC07P039609 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P039609 Gene

Function for GC07P039609 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P039609 Gene

Localization for GC07P039609 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P039609 Gene

Pathways & Interactions for GC07P039609 Gene

SuperPathways for GC07P039609 Gene

No Data Available

Interacting Proteins for GC07P039609 Gene

Gene Ontology (GO) - Biological Process for GC07P039609 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P039609 Gene

Drugs & Compounds for GC07P039609 Gene

No Compound Related Data Available

Transcripts for GC07P039609 Gene

fRNAdb Secondary structures for GC07P039609 Gene

  • FR284834
  • FR067639

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P039609 Gene

No ASD Table

Relevant External Links for GC07P039609 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P039609 Gene

Expression for GC07P039609 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P039609 Gene

Orthologs for GC07P039609 Gene

No data available for Orthologs and Evolution for GC07P039609 Gene

Paralogs for GC07P039609 Gene

No data available for Paralogs for GC07P039609 Gene

Variants for GC07P039609 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P039609 Gene

Disorders for GC07P039609 Gene

No disorders were found for GC07P039609 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P039609 Gene

Publications for GC07P039609 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC07P039609 Gene

Sources for GC07P039609 Gene

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