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Aliases for GC07P025596 Gene

Subcategory (RNA class) for GC07P025596 Gene


Quality Score for this RNA gene is


Aliases for GC07P025596 Gene

No Aliases found

ORGUL Members for GC07P025596 Gene

No data available for External Ids for GC07P025596 Gene

Summaries for GC07P025596 Gene

GeneCards Summary for GC07P025596 Gene

GC07P025596 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P025596 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P025596

Additional gene information for GC07P025596 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P025596 Gene

Genomics for GC07P025596 Gene

GeneHancer (GH) Regulatory Elements for GC07P025596 Gene

Promoters and enhancers for GC07P025596 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J025619 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +24.6 24620 1.4 LEF1 MAX YY1 ZNF766 GATA3 POLR2A VEZF1 RCOR1 CHD2 ZNF639 PIR49685 GC07P025596 LOC646588
GH07J025579 Enhancer 0.7 ENCODE 0.4 -15.9 -15871 1.9 HDAC1 TEAD4 TAL1 BACH1 FEZF1 ZIC2 FOSL1 ZNF766 ZNF316 CBFA2T2 GC07P025596 ENSG00000227386
GH07J025568 Enhancer 0.9 ENCODE 0.3 -27.3 -27309 0.8 CLOCK FOXA2 MLX ARID4B DMAP1 YY1 E2F8 ZNF143 FOS RUNX3 C7orf31 ENSG00000202233 TSEN15P3 ENSG00000227386 GC07P025596
GH07J025565 Enhancer 0.8 ENCODE 0.3 -30.0 -29958 0.2 RB1 ARNT RAD21 RFX5 ARID2 ZNF366 ZNF143 BCLAF1 RUNX3 THAP11 TSEN15P3 ENSG00000202233 ENSG00000227386 GC07P025596
GH07J025603 Enhancer 0.5 Ensembl 0.4 +7.3 7287 0.6 ZNF335 GLIS2 GLIS1 ZBTB26 ZBTB17 GC07P025596 PIR49685 LOC646588
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC07P025596 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P025596 Gene

Genomic Locations for GC07P025596 Gene
121 bases
Plus strand

Genomic View for GC07P025596 Gene

Genes around GC07P025596 on UCSC Golden Path with GeneCards custom track

GC07P025596 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P025596 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P025596 Gene

ORGUL Member Location for GC07P025596 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P025596 Gene

Proteins for GC07P025596 Gene

Post-translational modifications for GC07P025596 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P025596 Gene

Domains & Families for GC07P025596 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P025596 Gene

Function for GC07P025596 Gene

Phenotypes From GWAS Catalog for GC07P025596 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P025596 Gene

Localization for GC07P025596 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P025596 Gene

Pathways & Interactions for GC07P025596 Gene

SuperPathways for GC07P025596 Gene

No Data Available

Interacting Proteins for GC07P025596 Gene

Gene Ontology (GO) - Biological Process for GC07P025596 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P025596 Gene

Drugs & Compounds for GC07P025596 Gene

No Compound Related Data Available

Transcripts for GC07P025596 Gene

fRNAdb Secondary structures for GC07P025596 Gene

  • FR349003
  • FR284243

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P025596 Gene

No ASD Table

Relevant External Links for GC07P025596 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P025596 Gene

Expression for GC07P025596 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P025596 Gene

Orthologs for GC07P025596 Gene

No data available for Orthologs and Evolution for GC07P025596 Gene

Paralogs for GC07P025596 Gene

No data available for Paralogs for GC07P025596 Gene

Variants for GC07P025596 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P025596 Gene

Disorders for GC07P025596 Gene

No disorders were found for GC07P025596 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P025596 Gene

Publications for GC07P025596 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC07P025596 Gene

Sources for GC07P025596 Gene

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