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Aliases for GC07P020377 Gene

Subcategory (RNA class) for GC07P020377 Gene


Quality Score for this RNA gene is


Aliases for GC07P020377 Gene

No Aliases found

ORGUL Members for GC07P020377 Gene

No data available for External Ids for GC07P020377 Gene

Summaries for GC07P020377 Gene

GeneCards Summary for GC07P020377 Gene

GC07P020377 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07P020377 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC07P020377 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P020377 Gene

Genomics for GC07P020377 Gene

GeneHancer (GH) Regulatory Elements for GC07P020377 Gene

Promoters and enhancers for GC07P020377 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I020350 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -24.0 -23986 5.8 PKNOX1 NFIB INSM2 KLF17 FEZF1 BRCA1 RFX5 ZNF213 ZNF366 ZSCAN5C LOC101927811 ITGB8 ENSG00000200753 GC07P020377
GH07I020364 Enhancer 0.8 ENCODE dbSUPER 0.4 -11.7 -11745 1.8 STAT1 SMARCC1 JUN CEBPB REST EP300 BRCA1 ATF2 JUND POLR2A ITGB8 LOC101927811 GC07P020377
GH07I020359 Enhancer 0.5 dbSUPER 0.4 -17.9 -17867 0.8 ZFHX2 RCOR1 CHD2 EGR2 LOC101927811 GC07P020377 ITGB8
GH07I020340 Enhancer 0.6 ENCODE dbSUPER 0.3 -36.2 -36178 2.1 SP1 JUND BACH1 MACC1-AS1 ENSG00000243004 LOC101927811 ITGB8 GC07P020377
GH07I020346 Enhancer 0.6 FANTOM5 dbSUPER 0.3 -30.7 -30700 0.5 CTCF ITGB8 LOC101927811 GC07P020377
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07P020377 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07P020377 Gene

Genomic Locations for GC07P020377 Gene
72 bases
Plus strand

Genomic View for GC07P020377 Gene

Genes around GC07P020377 on UCSC Golden Path with GeneCards custom track

GC07P020377 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P020377 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P020377 Gene

Proteins for GC07P020377 Gene

Post-translational modifications for GC07P020377 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P020377 Gene

Domains & Families for GC07P020377 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P020377 Gene

Function for GC07P020377 Gene

Phenotypes From GWAS Catalog for GC07P020377 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P020377 Gene

Localization for GC07P020377 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P020377 Gene

Pathways & Interactions for GC07P020377 Gene

SuperPathways for GC07P020377 Gene

No Data Available

Interacting Proteins for GC07P020377 Gene

Gene Ontology (GO) - Biological Process for GC07P020377 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC07P020377 Gene

Drugs & Compounds for GC07P020377 Gene

No Compound Related Data Available

Transcripts for GC07P020377 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P020377 Gene

No ASD Table

Relevant External Links for GC07P020377 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC07P020377 Gene

Expression for GC07P020377 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P020377 Gene

Orthologs for GC07P020377 Gene

No data available for Orthologs and Evolution for GC07P020377 Gene

Paralogs for GC07P020377 Gene

No data available for Paralogs for GC07P020377 Gene

Variants for GC07P020377 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07P020377 Gene

Disorders for GC07P020377 Gene

No disorders were found for GC07P020377 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P020377 Gene

Publications for GC07P020377 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro. (PMID: 12215523) Galardi S … Bozzoni I (Molecular and cellular biology 2002) 1
  3. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C … Bachellerie JP (Journal of molecular biology 2000) 1
  4. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin AG … Fournier MJ (Cell 1996) 1

Products for GC07P020377 Gene

Sources for GC07P020377 Gene

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